Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0972 ATGGGTCGCGTCCGCACCAAAACCGTCAAGAAGTCTTCCCGCCAGGTGATCGAGAAGTACTACTCTCGAATGACATTGGACTTCCACACCAACAAGAAGATTCTTGAGGAGGTTGCTCTTATTCCATCCAAGAGACTCCGCAACAAGATTGCCGGATTCTCGACTCACCTCATGAAGAGGATCCAGAAGGGACCTGTTCGTGGAATTTCTCTCAAGCTTCAAGAGGAGGAGCGTGAGCGTCGCATGGATTTCGTCCCTGACGTCTCCGCCATCAAGACCGACCAGATCGAGGTCGATAAGGAGACTCTAGACATGCTCAATGCTCTTGGCATGAATGATATTCCGGGGCTCGTCAAAGTTGATCCCGTCCCTGTGCAGCAGACGTTGGGGTTCGGTCGTGGTTTTGGCGGAGGTAGGAGGTTTTAG 426 0.5211 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVALIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDVSAIKTDQIEVDKETLDMLNALGMNDIPGLVKVDPVPVQQTLGFGRGFGGGRRF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0972 141 PANTHER 40S RIBOSOMAL PROTEIN S17 1 124 IPR001210 GO:0003735|GO:0005840|GO:0006412
Acco06g0972 141 FunFam 40S ribosomal protein S17 1 62 - -
Acco06g0972 141 ProSitePatterns Ribosomal protein S17e signature. 41 56 IPR018273 GO:0003735|GO:0005840|GO:0006412
Acco06g0972 141 Hamap 30S ribosomal protein S17e [rps17e]. 1 63 IPR001210 GO:0003735|GO:0005840|GO:0006412
Acco06g0972 141 SUPERFAMILY Rps17e-like 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Acco06g0972 141 Gene3D - 1 62 IPR036401 GO:0003735|GO:0005840|GO:0006412
Acco06g0972 141 Pfam Ribosomal S17 1 120 IPR001210 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0972 Acco-ChrAcco06 6477393 6477818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0972 1 139 Cytoplasmic Ribosomal Protein Gene Family AT5G04800 83.453 8.01e-81 233