Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0910 ATGGGCTCATTCTCTGGCACTTGTGAAATAGTTGAAGCAGAGGAAGATCTAAATTCAGGTAAATCTGCAAGGATTTATCGGACAAATTCTGAATTTAGCATGGGTGAAAAAAATCAGAAGCTTCCAGTGCTACAGTTGGGATGCAAGGACAATCTGGAGAATGATATTAATAAGCTTTTCGAATCAGTTACTCTTAAGACTTCATCGAGGAATTCAGGCCTTTTACAAGATGGTACAAGCCCTAAGATGAAAAATACCTTAAAAAAGCCACTAACAGTGGGTGTTTCTTGGTCTCCTCGAGTTGGTACTTCTGAGCCTGCAACTCTGAAGCAGGCATTGAGAGACCTATCTTTATCCAAGGCTTCAGAAATGGCTGCTATGAAGCGATTATCAAAGTCAACAAATTCTCCCAGGATATCTGAGGTTGGGAAGATCAAGGCCTTGTACGATTCAGTTGTAGGTAAAGGCACTCAACATGGGTCTTCCTTTGTTGAGAATAAAGGGAGTGGAATTGAAGTATCAATATCATCAGAAGAGAGCAAAACAATTTCATTGGACAAAACGTGCCAGTCTCATAAAGCTGCCAATTTCACTTCATCGGGTGCCAGTGTTCATTTGTCTTCAAGAGCTGTAAGTGCAACTAAAGAAAGTGATGCAGCAACTTCTTCAATAGAAATTGATTTGGTAAGTTCATCAAGTACTAGTGGATTTCAATCTCAGCAATTAGGTTCTGATCAAACAGGAAAACAAACATCTGCAAATTCTTCATCTCTTTCTAATACTGATGGAAGCAAAGTAGAGTTGCCTGAATGTGATTCTGTGCCCAAAAGAATAGGAAATAAGGCATCTGCATCAAAGGTTGGGCGAAAAGTGAGGTTGCAAGTGCTTTCTTCCTCATCAACATCTACTTCGGTAAGTGGAAATAGAGTAAGAGGAACCCACAATGGCTCTCGTACAGTCAAATCAGTCGTAAGGAACAAGAATTTGAATAAGAAGAAACCGAAGCAGGATTCTGGTTCTTCTCTAAATGCTCCTACATCAAATGAAATGAATAGTAAATTAGTCCCCGGAACTATTCCACTGGTTTGTGAGAGATGTCGGTGCACTATAGAGGATACAAGTAAAGAAAAGAGCCAAGATAGTTTAGCGCCAGACTCTGCCAATCCTGGAGATGCAGTAAGTTCAAGTAATGTACATTACGGTGCAAACAAATCTGCTCCCTCATCAACTAACTGTAATAGAAGCAAAGCTGTAGCGAAAGTGAAAAAGAATGCCAGATTGAAAGAGCAACTTGAATTTTCACAAAGTTCAAAGAGTAGTCAAGAGTGCAGTAGTGGTACAAGTACTAGTGATGAAAGCAATGTGAGTGGGGCTAGTTGTGGCAACAGGCCTCACATGTCAAAGGATGTTAGGTGGGCAGCCATTCGTCAAGCTCATATGCAGCATGGAGTCTTGGGCTTGAGGCAGTTTAATCTTTTGAAGAAACTTGGTTGTGGAGACATTGGAACTGTATATCTTGCTGAACTAATTGGCGCAAATTGCTTATTTGCTATCAAGGTCATGGACAATGAATTTTTGGCAAGAAGGAAGAAGATTTCTAGGGCTCAAACTGAAAGGGATATTTTAAGGATTCTTGATCATCCTTTTCTACCCACGCTCTACGCTCAATTCACATCAGATAATTTGTCATGTCTGGTCATGGAATATTGTCCAGGTGGGGATCTTCATGTTCTACGGCAGAAGCAGCTTGGTAGAAGTTTTACTGAGCCAGCAGCTAGGTTTTATGTTGCTGAGGTCCTTCTTGCTTTAGAGTACTTGCACATGCTTGGAATTGTTTACCGGGATTTGAAACCTGAAAACATTCTTGTTCGGGAAGATGGACACATAATGCTTACAGATTTTGACCTGTCACTAAGGTGTCATGTCAGCCCAACGCTTCTGAAATCATCTTTTGATGCAGATCCAGCAAGGATTTCTGGTCCTTGTGCACGATCTAGTTGCATTGAGCCATTCTGCATTGAGCCATCCTGTCAAGTTTCGTGCTTCAGCCCTAGATTCTTGCCTGCTGCTGCAAAAACAAGGAAATTGAAAGCTGATCTTGCCGTGCAGATCAGATCATTGCCTCAACTTGTGGCTGAGCCTACTGATGCAAGATCAAATTCTTTTGTTGGCACCCACGAATACTTGGCTCCTGAGATCATCAAAGGGGAGGGACATGGTGCTGCAGTTGATTGGTGGACCTTTGGTGTTTTTCTTTACGAACTTTTATATGGTAGAACACCCTTTAAAGGTTCTAATAATGAAGAAACATTAGCTAATGTGGTGTTGCAAAGTCTCAAATTTCCTGACAGTCCGTTTGTTAGTTCCCAAGCCAAGGATCTCATAAGAAGGTTGCTGGATAAAGAACCGGAAAGACGTTTGGGTTCAGAGAAAGGAGCTGCTGATATTAAACAGCATCCCTTTTTCGAGGGCCTTAATTGGGCACTAATTCGATGTACTGTCCCACCAGAGCTTCCGGAATTTTGTGATTTTGGAGTTCCAGACATGACTTCACAAGGCAAGTATTTTGAGTGTAAATCAACCGGAGAACATGTGGAATTTGAGTTGTTTTGA 2613 0.4137 MGSFSGTCEIVEAEEDLNSGKSARIYRTNSEFSMGEKNQKLPVLQLGCKDNLENDINKLFESVTLKTSSRNSGLLQDGTSPKMKNTLKKPLTVGVSWSPRVGTSEPATLKQALRDLSLSKASEMAAMKRLSKSTNSPRISEVGKIKALYDSVVGKGTQHGSSFVENKGSGIEVSISSEESKTISLDKTCQSHKAANFTSSGASVHLSSRAVSATKESDAATSSIEIDLVSSSSTSGFQSQQLGSDQTGKQTSANSSSLSNTDGSKVELPECDSVPKRIGNKASASKVGRKVRLQVLSSSSTSTSVSGNRVRGTHNGSRTVKSVVRNKNLNKKKPKQDSGSSLNAPTSNEMNSKLVPGTIPLVCERCRCTIEDTSKEKSQDSLAPDSANPGDAVSSSNVHYGANKSAPSSTNCNRSKAVAKVKKNARLKEQLEFSQSSKSSQECSSGTSTSDESNVSGASCGNRPHMSKDVRWAAIRQAHMQHGVLGLRQFNLLKKLGCGDIGTVYLAELIGANCLFAIKVMDNEFLARRKKISRAQTERDILRILDHPFLPTLYAQFTSDNLSCLVMEYCPGGDLHVLRQKQLGRSFTEPAARFYVAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLTDFDLSLRCHVSPTLLKSSFDADPARISGPCARSSCIEPFCIEPSCQVSCFSPRFLPAAAKTRKLKADLAVQIRSLPQLVAEPTDARSNSFVGTHEYLAPEIIKGEGHGAAVDWWTFGVFLYELLYGRTPFKGSNNEETLANVVLQSLKFPDSPFVSSQAKDLIRRLLDKEPERRLGSEKGAADIKQHPFFEGLNWALIRCTVPPELPEFCDFGVPDMTSQGKYFECKSTGEHVEFELF 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0910 870 MobiDBLite consensus disorder prediction 292 324 - -
Acco06g0910 870 MobiDBLite consensus disorder prediction 374 417 - -
Acco06g0910 870 MobiDBLite consensus disorder prediction 430 462 - -
Acco06g0910 870 SMART serkin_6 490 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0910 870 MobiDBLite consensus disorder prediction 335 354 - -
Acco06g0910 870 SUPERFAMILY Protein kinase-like (PK-like) 469 845 IPR011009 -
Acco06g0910 870 ProSitePatterns Serine/Threonine protein kinases active-site signature. 611 623 IPR008271 GO:0004672|GO:0006468
Acco06g0910 870 Gene3D Transferase(Phosphotransferase) domain 1 715 836 - -
Acco06g0910 870 ProSiteProfiles Protein kinase domain profile. 490 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0910 870 FunFam serine/threonine-protein kinase D6PK-like 574 641 - -
Acco06g0910 870 FunFam Serine/threonine-protein kinase D6PK-like 488 573 - -
Acco06g0910 870 FunFam serine/threonine-protein kinase D6PK-like 717 840 - -
Acco06g0910 870 CDD STKc_phototropin_like 488 840 - -
Acco06g0910 870 Gene3D Transferase(Phosphotransferase) domain 1 570 638 - -
Acco06g0910 870 Gene3D Phosphorylase Kinase; domain 1 488 569 - -
Acco06g0910 870 MobiDBLite consensus disorder prediction 380 417 - -
Acco06g0910 870 Pfam Protein kinase domain 719 822 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0910 870 Pfam Protein kinase domain 491 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0910 870 MobiDBLite consensus disorder prediction 235 354 - -
Acco06g0910 870 PANTHER FLIPPASE KINASE 1-RELATED 264 842 - -
Acco06g0910 870 MobiDBLite consensus disorder prediction 430 461 - -
Acco06g0910 870 MobiDBLite consensus disorder prediction 235 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0910 Acco-ChrAcco06 6098156 6101543 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0910 1 870 AGC Kinase Gene Family AT3G52890 50.417 0.0 809
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Acco06g0910 Pkinase 1.4e-35 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1629 02 12472481 12473148 Acco06g0910 06 6098156 6101543 CCT
Acco06g0910 06 6098156 6101543 Acco06g0910 06 6098156 6101543 ECH