Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0904 ATGGACTTGTATCTGAAACAATGGAGAAACCAAGATGAGTCAGTGGCAGAGGAACAACACTCTGCAAAGATGCCAAAACTTGTTCTCGAATCTCATCAAAAGCCACAATCATCTGCCTCTGCTCTCCCTCTGTTTGTACCCCAACCCAACCCTAAAGTCAGCACCTTGTCAGCATTCTCTGATTCAACCTCAGCTTCTACCAGTGTTCCCCGGATGGGGAGTTATTTCAGCTTCTCTCAGTGGCAGGAGCTTGAGTTGCAGGCTTTGATTTTCAGGTACATGTTAGCCGGCGCTGCTGTGCCTCCTGAGCTTCTTCGCCCAATCAAGAAAAGCCTTCTTCAATCTTCTTCCTATTTCCTCCAACACTACCCACACTATGACCCTGCTTTAGCATTGCAATCAGGGTATTGGGGAAAGGTAGCCATGGATCCAGAGCCTGGCCGGTGCCGGAGGACTGATGGCAAAAAGTGGCGGTGCTCGAGGGACGTGGTTGCTGGCCAGAAATACTGCGAGCGCCACGTGCATCGCGGTCGAAACCGTTCAAGAAAGCCTGTGGAACTACCCACACTAAACGCTGCCGGTGGCGGTGGCTCTGGCAGCGGCGGAGGCTCTGTCAGTGCTCCAATATCCATGACTGCGCCGTCTTTGCCAACGGCTTCACTGAGTTCCCGTTTCGATTTCCATCTTGATCAAAGTTTCTTTGGGACCAATAATGAAAACAAGAGCCAGTTTGGAATCCAAGATGATGGGTTTACTGGGGATGGCAAATCTGATGGTCATATCCTGCGATGTCATTTTAATGATTGGCCAACATCACTTGAAAAATCTGACATTGCCGAAAGCGGGGTTAGTAACTCCTTCGACTCGATGACATGTCTGTATTCTTCGTCGGATTTGTCTTTGAAATTATCCATTGGGTATGGAGAAAACCTGTGTCCAAGAAATGGATATGTGGAAAAGAGAGCAGCGACAGACAAACTGGGCAGGAGGATGGAGTTCGGCTAA 1005 0.4915 MDLYLKQWRNQDESVAEEQHSAKMPKLVLESHQKPQSSASALPLFVPQPNPKVSTLSAFSDSTSASTSVPRMGSYFSFSQWQELELQALIFRYMLAGAAVPPELLRPIKKSLLQSSSYFLQHYPHYDPALALQSGYWGKVAMDPEPGRCRRTDGKKWRCSRDVVAGQKYCERHVHRGRNRSRKPVELPTLNAAGGGGSGSGGGSVSAPISMTAPSLPTASLSSRFDFHLDQSFFGTNNENKSQFGIQDDGFTGDGKSDGHILRCHFNDWPTSLEKSDIAESGVSNSFDSMTCLYSSSDLSLKLSIGYGENLCPRNGYVEKRAATDKLGRRMEFG 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0904 334 ProSiteProfiles WRC domain profile. 143 187 IPR014977 -
Acco06g0904 334 Pfam QLQ 76 108 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco06g0904 334 ProSiteProfiles QLQ domain profile. 75 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco06g0904 334 SMART QLQ_2 74 110 IPR014978 GO:0005524|GO:0005634|GO:0006355
Acco06g0904 334 PANTHER GROWTH-REGULATING FACTOR 5 48 295 IPR031137 GO:0005634|GO:0006351|GO:0032502
Acco06g0904 334 MobiDBLite consensus disorder prediction 175 209 - -
Acco06g0904 334 Pfam WRC 144 186 IPR014977 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0904 Acco-ChrAcco06 6061093 6063119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0904 1 306 GRF Transcription Factor Family AT3G52910 45.706 9.33e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Acco06g0904 WRC 7.7e-22 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1403 02 10499679 10501577 Acco06g0904 06 6061093 6063119 CCT
Acco06g0904 06 6061093 6063119 Acco06g0904 06 6061093 6063119 ECH