Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0897 ATGTTTTTAACAAACACGGTCTCCAACCCAGAAATCCAACACTTACCGAGCTGGCTTACAACCCAGATCTCGGCACACGGCAGTTCAGCAACAACTGGTCAGCACCTGCACTCTACCTCCCAACTGCTTCATCTTCCTCCCATAAATGGCTTCCTCCAACTGTCAACTGCCACAACCAATCCATCCAACGTCTATCACAACAACAACATGTTTGGAAGCAGCAGAAGCAAATCTAATTCCTCAACTGGGCGTCACCCCGTTTACAAGGGAGTGAGGCGCAGGAGCAGCGGCAAATGGGTGTCTGAAATTCGTGAGCCTAAGAAGCCCAACCGGATTTGGTTAGGCACATTCCCTACCCCTGAAATGGCCGCCGTCGCCTACGACGTGGCCGCCCTCGCTCTTAAGGGTCAGCACGCCGACCTTAACTTCCCCGACTCCGCTTCTTCCTTGCCCGTCCCTGCAACTACCACCCCCTCTGACATTCAGGTGGCTGCTGCCAGCGCCGCCGCCGCAGTCGGGGCTGCTAAGGATGCTTTGTCGGCCGGCGCTGGGGAGTCATCTTCTTCGGTGTCACTGAAAAACAACGAAGCGAGTGCGGTGGAGGAGTTCGTGGATGAGGATTTGATCTTTGATATGCCAAATGTGCTGAGCCATATGGCAGAAGGAATGATGCTCGCTCCTCCTCCACTGGACTGGGATGCTGTTGCCCCCCAAGATTACATGTCTCAGGACCCATACCTTTGGAACTTCCGTCCTTAA 759 0.5428 MFLTNTVSNPEIQHLPSWLTTQISAHGSSATTGQHLHSTSQLLHLPPINGFLQLSTATTNPSNVYHNNNMFGSSRSKSNSSTGRHPVYKGVRRRSSGKWVSEIREPKKPNRIWLGTFPTPEMAAVAYDVAALALKGQHADLNFPDSASSLPVPATTTPSDIQVAAASAAAAVGAAKDALSAGAGESSSSVSLKNNEASAVEEFVDEDLIFDMPNVLSHMAEGMMLAPPPLDWDAVAPQDYMSQDPYLWNFRP 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0897 252 MobiDBLite consensus disorder prediction 69 85 - -
Acco06g0897 252 ProSiteProfiles AP2/ERF domain profile. 87 144 IPR001471 GO:0003700|GO:0006355
Acco06g0897 252 MobiDBLite consensus disorder prediction 69 94 - -
Acco06g0897 252 SUPERFAMILY DNA-binding domain 87 146 IPR016177 GO:0003677
Acco06g0897 252 CDD AP2 88 146 IPR001471 GO:0003700|GO:0006355
Acco06g0897 252 SMART rav1_2 87 150 IPR001471 GO:0003700|GO:0006355
Acco06g0897 252 PRINTS Ethylene responsive element binding protein signature 110 126 IPR001471 GO:0003700|GO:0006355
Acco06g0897 252 PRINTS Ethylene responsive element binding protein signature 88 99 IPR001471 GO:0003700|GO:0006355
Acco06g0897 252 Gene3D AP2/ERF domain 87 145 IPR036955 GO:0003700|GO:0006355
Acco06g0897 252 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 75 249 IPR045277 GO:0003700
Acco06g0897 252 FunFam Ethylene-responsive transcription factor 2 86 145 - -
Acco06g0897 252 Pfam AP2 domain 86 136 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0897 Acco-ChrAcco06 5993572 5994330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0897 75 250 AP2-EREBP Transcription Factor Family AT2G36450 59.890 1.66e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g0897 AP2 3.5e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1406 02 10558378 10560142 Acco06g0897 06 5993572 5994330 CCT
Acco06g0897 06 5993572 5994330 Acco06g0897 06 5993572 5994330 ECH