Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0896 ATGATTTCTGAGTTTACAGATAATGTGAAGACTGTGGCACTGTGGGGAGAAAAGCTAAGACTGAGTTCGTTCTGTGATGTTCATGGTAAATTAAATATGGGGGATCGGGAACCTTGTCTGAACAGCAACAGAAAAAAGGTGCGTAGCCGGTTAGAGGAAAATGCGAAAGACAAGACGCGAGGTGATGGATGGAATAATTGGGGCAAGTCAAAAGGGGAGGATCCAAGGCAGCATGAAGGAGGCGTCAGCATATTAGAGGCCCAACCGCTTGACCCTCCAAATCTTATGGAAATGGAGGACCATCATCATCATCACCGTCATCAGCAACAGCATCAGCAACATCTTGATTATGCAACCATGGGGGATCTCCGCCACCTCATGACTGCACCCAGGCCCCTCTCGGCCGACCTCTTCCCGGCTCACCCCCCCGGCGCCCACCACTACGACGCCTTGTCCTTCGGTCGTCATCAACTGATGCCTGATATCATGCCTCCTGCACTCCACGATTCTTCTCCTCTTAATACTAGCATTTCTGTGGCCACTCCCTCAGCCGCCGCCGCCACTACTCCCTCCCTTAGTGCCTTTGAGGCTGACACTTCCGGGTGTTTCCCCGGAGACGCCTCCTCTGCACGATGGCCCAGACAGGAAACCCTTACACTTCTTGAGATCAGATCTCGTCTCGACTCTAGATTCAGACACGCCAATCAAAAGGGCCCTTTATGGGATGAGCTTTCTAGAATCATGGCCGAAGAATATGGATATCAAAGGAGCGGCAAAAAATGCAGGGAAAAATTCGAAAACCTGTACAAATATTACAAGAAAACAAAAGAAGGCAAGGCAGGAAGACAAGATGGGAAGCATTACAGATTCTTCCGCCAACTTGAAGCCTTATATGGAGAAAACACCAACCCAATAACCTCAGCCCAAGAAACCAATTTCGGTAGCAACAACAGTAGCCTTCACTTTCACACACCCTCCCAAACAAACCAAGACATTTTTAATAGGCACTGTGATAGCGTTAGCCTCACTAATAATAACTCCACTGATGAGCTGGACACGTCATCAACGGATGAAAATGATTCGACGGAGAGGATGAGGAGAAAGAGAAGAGGAAGAAGAAGCTGGAAAGTAAAGATAAAAGAGCTGATAGACTCAGAGATGAAGAAGGTGATGGAGAAGCAAGAGGCATGGTTGGAGAGATTAATGAAGACACTGGAGGAGAAGGAAAAGGAGAGGGCTTTGAGAGAGGAAGAATGGAGTAAAAAAGAGGCAGCAAGGTTGGATAAGGAGCATAAGTTTCGGGCTCAAGAGAGGGCATGGATTGAAGCCAGAGATGCAGCTTTAATGGAGGCACTGCAGAAATTAACAGGAAGAGAAATAGTAAAGGCTGATGTTGATCGACCAAATGCTGATATTCAAAATTACAGTGAAAATCAGAATGAAGATGGAAGTGAGATACTACATAGCACTGACAGAGTTGGTGAAAGTTGGACAGAATATGAGATCAGTAATATGGTTCAGATGAGAGCTGAGGTGGAATCCAGGTTTGGGGAAAATGGGTGTCCGGAGGAGGTTCTGTGGGAGGAAGTTGCTAACAAAATGGCTTGTTTTGGTTACCATAAGGCTGCATCCGTGTGCAAAGACAAGTGGGAAGGTATCAGAAGTAGCTATCATCATCACAAGAAGTGCAACAAGCATAATTCATCGGCTACTTTTTACTTGGAAACCAATAATAATAATAATAATCAGTCACCCCTATATAATCATCAAGGAAGCAGTGTTTATTGTGACGTCAACCAACAGCGGCAGGATGGTTCTTCACCTTCAAATTCTAACGTTGGCAATAATGCTGCTGGGCCTGATGGTTGTTTTCCCTTGTTCATGTGTGCAGGAGAAAATATGTGGGACAATTTTGGCTTAAAGTTCAACAAAGGAAACCAGAACCCGTGA 1950 0.4585 MISEFTDNVKTVALWGEKLRLSSFCDVHGKLNMGDREPCLNSNRKKVRSRLEENAKDKTRGDGWNNWGKSKGEDPRQHEGGVSILEAQPLDPPNLMEMEDHHHHHRHQQQHQQHLDYATMGDLRHLMTAPRPLSADLFPAHPPGAHHYDALSFGRHQLMPDIMPPALHDSSPLNTSISVATPSAAAATTPSLSAFEADTSGCFPGDASSARWPRQETLTLLEIRSRLDSRFRHANQKGPLWDELSRIMAEEYGYQRSGKKCREKFENLYKYYKKTKEGKAGRQDGKHYRFFRQLEALYGENTNPITSAQETNFGSNNSSLHFHTPSQTNQDIFNRHCDSVSLTNNNSTDELDTSSTDENDSTERMRRKRRGRRSWKVKIKELIDSEMKKVMEKQEAWLERLMKTLEEKEKERALREEEWSKKEAARLDKEHKFRAQERAWIEARDAALMEALQKLTGREIVKADVDRPNADIQNYSENQNEDGSEILHSTDRVGESWTEYEISNMVQMRAEVESRFGENGCPEEVLWEEVANKMACFGYHKAASVCKDKWEGIRSSYHHHKKCNKHNSSATFYLETNNNNNNQSPLYNHQGSSVYCDVNQQRQDGSSPSNSNVGNNAAGPDGCFPLFMCAGENMWDNFGLKFNKGNQNP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0896 649 FunFam trihelix transcription factor PTL-like 212 274 - -
Acco06g0896 649 CDD GT1 211 276 - -
Acco06g0896 649 PANTHER FI21293P1 187 601 - -
Acco06g0896 649 MobiDBLite consensus disorder prediction 339 370 - -
Acco06g0896 649 Coils Coil 388 418 - -
Acco06g0896 649 Gene3D - 212 274 - -
Acco06g0896 649 Gene3D - 497 559 - -
Acco06g0896 649 MobiDBLite consensus disorder prediction 45 79 - -
Acco06g0896 649 FunFam Trihelix transcription factor GT-2 497 559 - -
Acco06g0896 649 Pfam Myb/SANT-like DNA-binding domain 496 575 IPR044822 -
Acco06g0896 649 Pfam Myb/SANT-like DNA-binding domain 210 297 IPR044822 -
Acco06g0896 649 CDD GT1 497 557 - -
Acco06g0896 649 ProSiteProfiles Myb-like domain profile. 204 269 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0896 Acco-ChrAcco06 5979469 5983351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0896 211 644 Trihelix Transcription Factor Family AT5G03680 49.061 9.49e-130 393
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco06g0896 Myb_DNA-bind_4 3.3e-19 CL0123