Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0892 ATGGATCGAATGAAAAAGGATTGCAGAGTAAAGTTACGAAAAATATTACGATTGCGCCACCGAATAAAAGCTCCGTCGCTTTTTATCTTTTCTTCTCCCTCTCTTCGGCCATCGAACTCTAGGGAGAGGGCCAAGGAGGATCCACAGTCACCTGGTCCTGCGGAGAGACGTCTGTTGGCAAAATGGCGAGTTTTAGGGTTTTCTGAACAGCGGATACTTACAGTACCCATGGAAATGCCTGCTAGAAAATCCAACTACACTATTCTGAACCAAATTCCCGATGAAGAGTTCGTTGGCGGTTCAGTCTTGTCCGCCACTACTGCTGCTCCCACTTCTTTGTTTGATTCTTCATCCGGAGACGGCAAGAACAATAAAGGAAAGCTTGACAGAGGATATGATTGGGACTCGGTTGCTGATCATAGGGTCCCTCAGCAGGGAAATCGGATCGGTAATTTATACCCATCGATCGGCTTGCAGAGGCAGTCCAGTGGTAGCAGTTTTGGTGAAAGCTCTTTGTCCGGAGAGTATTATGCTCCAACTCTGTCCACGGCAGCTGCAAATGAGATCGATACCTTTGGTTATATGCATGACGATGGGTTCAAGGTTGGAGGTGGTGCTGGTGTTGGAGGCGAGCTACGGAACAAGTTAGTAGAGACAGCGGTAATGATGGGAGAGACTTCGTCGGGCAAAAGCTGGGCGCAGCAGACGGAGGAAAGTTATCAATTGCAGCAGGCTTTGGCACTCAGGCTCTCATCCGAGGCAACATGTGCTGATGATCCAAACTTTCTGGATCCATTACTGGGTGAATCTACTTTCAGGTCGTCATCGTCAAATTCGGCAGAAGCAGTATCACATCGATTCTGGGTCAATGGTTGCCTATCTTACTCTGACAAGATTCCAGACGGCTTCTACCTTGTCCATGGGATGAATCCCTATGTGTGGACTGTGTGTAATGATCTACAGGAAATTGGCCGAATTCCATCAATTGAATCACTAAAGTCTGTAGATCCCTGCTATGATTCTTCACTTGAAGTGGTTTTGGTGGATCAACGTAGCGATCATAGCTTAAAGGAGCTGCAAAACAGAGTACGTAGCATTTCTAGTAGCTGCATAACTACAGAAGAGGTTGTAGACCATCTTGCTAAGTTGGTCTGCAACCGTATGGGGGGTTCAGCTTCTGTTGGGGAAGATGACTTTATTTCCATCTGGAGGGCGTGCAGTAATGATCTAAAAGATTGCTTGGGATCCATTGTTGTTCCTTTAGGTAGTCTATCTGTTGGCCTCTGTAGGCATCGTGCTATACTGTTCAAAGTGCTAGCTGATACCATTGATTTGCCCTGTCGAGTTGCTAAGGGCTGTAAATATTGTTTAAGAGATGACGCTTCCTCCTGTCTTGTCCAATTTAGGCTTGAAAGGGAATACCTGGTTGATTTAATAGGGAAGCCAGGTTATTTATGCGAGCCAGATTCCTTGCTCAACGGTCCATCCTCCATCTCATTTTCTTCACCCTTGAGCTTTCCAAGGCTTAAACCAGCTGTACCTACCATTGATTTCAGGTCATTGGCCAAAGAGTATTTTTCGGATTGTGTCTCTCTTGAGCTTGTCTTTGACAATGATTCTGCAGAAAAGTTTGATGGGAAGGGCAGAGGCAGAAATAATGTTAGGTCAAATTCAAATGATAGCAGCAAAAGTCCTCACCAGTCTCTGCATTCAGAAGTTTCTCTTTTAAGAACTCATAATCAGAGTTCTGAAACATTTGCATCATGCAATGACGCTCCTCAGAATGTAGACCCTACGCCCATGGGCAAGGATCTACTGCCTTCTGCTATAATGCTGACAAAGTCAAATGTTGATGTTACTGAGGGTAGGAGGTTTGCTGAAGGAAGTCAACTGGTTGCTAGCAAAATCAGTAGAGAGCTTGGCCTTGATGTGGAGCATTTTGACATACCTTGGAGTGACCTTGCTTTAAAAGAGAGAATTGGATCGGGATCTTTTGGAACAGTACATCGAGCTGAGTGGAATGGCTCGGATGTTGCTGTTAAAATTTTAATGGAACAAGATTTTCATGCTGAAAGATACAAGGAGTTCCTGAGAGAGGTTGCTATAATGAAACGCTTGCGGCATCCAAATATTGTTTTATTTATGGGCGCAGTTACTCAGCCTCCAAACTTATCAATTGTCACGGAATATTTATCTAGGGGTAGCTTATACAGGCTGTTACACAGACCTGGTGCCAGAGAGATGTTGGATGAGAGGCGTAGACTGAGTATGGCTTATGATGTGGCAAAGGGAATGAACTATCTTCACAAACGCAATCCTCCCATTGTTCATAGAGATCTGAAGTCTCCAAACCTTCTTGTAGACAAAAAATATACTGTGAAGGTTTGTGATTTTGGCCTTTCACGTCTCAAGGCAAATACATTTCTCTCATCCAAGTCTGCTGCTGGGACTCCTGAGTGGATGGCCCCGGAAGTTCTACGAGATGAGCCATCCAATGAAAAGTCAGATGTTTATAGTTTTGGTGTAATCTTGTGGGAGCTGACAACATTGCAACAACCGTGGAGTAATTTGAATCCTGCACAGGTTGTGGCAGCTGTTGGTTTTAAGGGCAAAAGGCTTGAGATTCCACGTGATTTGAATCCCCAAGTAGCTGCAATAATCGAGGTTTGCTGGGCTAGCGAGCCGTGGAAACGTCCTTCTTTTTCAAGTATAATGGATTCTTTAAGATCATTGATCAAACCTCCTGCACCTCAACCTGCACGTCCAAACATCCCCTTGCTTACCTGA 2787 0.4482 MDRMKKDCRVKLRKILRLRHRIKAPSLFIFSSPSLRPSNSRERAKEDPQSPGPAERRLLAKWRVLGFSEQRILTVPMEMPARKSNYTILNQIPDEEFVGGSVLSATTAAPTSLFDSSSGDGKNNKGKLDRGYDWDSVADHRVPQQGNRIGNLYPSIGLQRQSSGSSFGESSLSGEYYAPTLSTAAANEIDTFGYMHDDGFKVGGGAGVGGELRNKLVETAVMMGETSSGKSWAQQTEESYQLQQALALRLSSEATCADDPNFLDPLLGESTFRSSSSNSAEAVSHRFWVNGCLSYSDKIPDGFYLVHGMNPYVWTVCNDLQEIGRIPSIESLKSVDPCYDSSLEVVLVDQRSDHSLKELQNRVRSISSSCITTEEVVDHLAKLVCNRMGGSASVGEDDFISIWRACSNDLKDCLGSIVVPLGSLSVGLCRHRAILFKVLADTIDLPCRVAKGCKYCLRDDASSCLVQFRLEREYLVDLIGKPGYLCEPDSLLNGPSSISFSSPLSFPRLKPAVPTIDFRSLAKEYFSDCVSLELVFDNDSAEKFDGKGRGRNNVRSNSNDSSKSPHQSLHSEVSLLRTHNQSSETFASCNDAPQNVDPTPMGKDLLPSAIMLTKSNVDVTEGRRFAEGSQLVASKISRELGLDVEHFDIPWSDLALKERIGSGSFGTVHRAEWNGSDVAVKILMEQDFHAERYKEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHRPGAREMLDERRRLSMAYDVAKGMNYLHKRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKANTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELTTLQQPWSNLNPAQVVAAVGFKGKRLEIPRDLNPQVAAIIEVCWASEPWKRPSFSSIMDSLRSLIKPPAPQPARPNIPLLT 928
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0892 928 ProSitePatterns Serine/Threonine protein kinases active-site signature. 775 787 IPR008271 GO:0004672|GO:0006468
Acco06g0892 928 Gene3D Phosphorylase Kinase; domain 1 647 732 - -
Acco06g0892 928 ProSiteProfiles Protein kinase domain profile. 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0892 928 MobiDBLite consensus disorder prediction 34 55 - -
Acco06g0892 928 Pfam Protein tyrosine and serine/threonine kinase 655 908 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 FunFam Serine/threonine-protein kinase isoform 1 644 732 - -
Acco06g0892 928 FunFam Serine/threonine-protein kinase CTR1 733 918 - -
Acco06g0892 928 CDD STKc_MAP3K-like 660 908 - -
Acco06g0892 928 MobiDBLite consensus disorder prediction 551 574 - -
Acco06g0892 928 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 286 911 - -
Acco06g0892 928 Gene3D Transferase(Phosphotransferase) domain 1 733 918 - -
Acco06g0892 928 PRINTS Tyrosine kinase catalytic domain signature 769 787 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 PRINTS Tyrosine kinase catalytic domain signature 879 901 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 PRINTS Tyrosine kinase catalytic domain signature 728 741 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 PRINTS Tyrosine kinase catalytic domain signature 835 857 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 PRINTS Tyrosine kinase catalytic domain signature 816 826 IPR001245 GO:0004672|GO:0006468
Acco06g0892 928 SUPERFAMILY Protein kinase-like (PK-like) 643 907 IPR011009 -
Acco06g0892 928 MobiDBLite consensus disorder prediction 546 574 - -
Acco06g0892 928 ProSitePatterns Protein kinases ATP-binding region signature. 660 681 IPR017441 GO:0005524
Acco06g0892 928 Pfam Ethylene-responsive protein kinase Le-CTR1 280 486 - -
Acco06g0892 928 SMART serkin_6 654 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0892 Acco-ChrAcco06 5946453 5954433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0892 77 924 MAP Kinase Kinase Kinase AT5G03730 65.517 0.0 1003
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Acco06g0892 PK_Tyr_Ser-Thr 3.4e-71 CL0016