Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0882 ATGCACACTAAGCTCTGCTCTCTTCTTCATAACATGAACAAGGCTTTTCCTTTAAACCTTGCATTGGTCTTGGCCTTCGCTTCACTCTGTTGTGTCTCAAAGTCTCTGGGTTTTACCCAAAATGACACTCACGCTCTCACTCAATTCCGCCTCCAAGCTGATGCTCATGGCCATCTTCTCGTCAACTGGACTGGCGCCGACGCCTGCTCTGCTTTCTGGCGCGGCGTTCAGTGCTCCCCTAATGGCCAAGTCGTTGGAATCTCGCTTCCTTCTCTTAATCTCCGAGGCCCTGTTGATTCTCTGTCTTCGTTAAGCTACTTGCGCCTCCTTGACCTTCATGACAATCGCTTAAACGGCAGCGTCGCGCCTCTCTCTAACTGTACCAGCCTTGAACTTCTTTATCTCTCCGGGAATGACTTCTCCGGCGAGCTGCCGCCGGAGATAGCTTCCCTCACGCGTCTGCTCAGGCTTGACCTCTCTGACAACAACATCCGAGGTCCCATTCCGAAGGAACTGTCTAAATTGACTGCGCTTCTCACGCTTAGGCTACAGAACAATGATCTCTCTGGTCATATCCCTGATCTTTCTGATTCTCTGCTCAAACTCAAGGAGCTCAACATGACCAACAACGAGTTTTATGGAAGATTACCCGATGGATTGTTGAAGAAATTCGGTGATGTAAGTTTCTCTGGGAATAAAGGTCTGTGTGGATCAAACCCATTACCGGTTTGTTCCTCCACAACAGAAAACTTTCCTTCTTCTTCTTCAGCACCGGCTCCAACAATTCCTTCTAAGCCAACCCCAATACCCCAAACAAACGCAACTCCTCCTCCCAAAACCCAACCCCGAAAGGGGTTAAGCACCGGAGTTATTGTAGCCATTGTGGTGGCGAATTGTGTGGCATTTCTGGTGATAACCTCTTTCATCGTTGCTCATTGCTGCGCTAGAGGACGAACCTCCGATTCTATGGTGGGTAGCGAAATTGGGAAGAGGAAAAGTGGGAGTAGCTATGGAAGTGAGAAAAAGGTGTACGCAAGTGGGTGTGTAGACAGTGACGGAACCACTGGAACGGACCAAAGCAGGCTTGTATTTTTCGATAGAAGGAGCCGATTCGAGCTGGAAGATTTGCTCCGAGCATCGGCGGAGATGCTGGGAAAAGGAAGCTTGGGAACAGTGTACAAGGCAGTGCTCGACGATGGATGCACCGTCGCGGTTAAGAGACTCAGAGACGCAAACCCATGTGCCTGGAAAGAGTTCGAACAGTACATGGATGTGATCGGAAAGCTCAAGCACCCCAATATTGTGAGACTCAGAGCTTATTACTATGCCCGAGAAGAAAAGCTCCTCGTCTATGATTATCTCCCCAACGGAAGCCTGCATTATCTTCTTCACGGGAACCGTGGTCCAGGAAGAATCCCTCTGGATTGGACTACGAGAATAAGCTTGGTTTTAGGGGCAGCCAGAGGACTCGCTCGGATTCATGCGGAATATAGTGCAGCAAAAATACCTCACGGCAACATAAAATCTTCCAACGTTGTACTCGATAAGAATGGCGTTGCTTGCATCTCTGACTTCGGCTTGTCTCTGCTGTTAAACCCTGTTCATGCAATCGCAAGATTGAGTGGATACAGAGCTCCCGAACAAGAAGACAGCAAGAAGCTGTCTCAGCAGGCAGACGTGTACAGCTTCGGTGTCTTGCTGTTGGAAGTTCTCACAGGTAAGACTCCATCCCAGGAGCCATCACCGACACGTCCTAGGTTGGTTGACGACGAACAAACTGTGGATCTCCCGAAATGGGTGCGATCTGTAGTGAAGGAAGAATGGACAGCGGAAGTGTTTGATCAAGAACTGTTGAGGTACAAGAACATAGAGGAAGAGCTTGTTTCGATGTTGCATGTGGGACTGTCGTGTGTGGTGGCAGAGGCAGAGAAGAGGCCATCCATGGCGGAAGTTGTTAAGATGATTGAAGAAATCAGGGTGGAGCAATCTCCTCTAGGGGAAGACTATGATGAGTCTCGCAATTCACTTTCACCTTCCCTTCCCACCACTGAAGATGGACTGGCTTAA 2067 0.4925 MHTKLCSLLHNMNKAFPLNLALVLAFASLCCVSKSLGFTQNDTHALTQFRLQADAHGHLLVNWTGADACSAFWRGVQCSPNGQVVGISLPSLNLRGPVDSLSSLSYLRLLDLHDNRLNGSVAPLSNCTSLELLYLSGNDFSGELPPEIASLTRLLRLDLSDNNIRGPIPKELSKLTALLTLRLQNNDLSGHIPDLSDSLLKLKELNMTNNEFYGRLPDGLLKKFGDVSFSGNKGLCGSNPLPVCSSTTENFPSSSSAPAPTIPSKPTPIPQTNATPPPKTQPRKGLSTGVIVAIVVANCVAFLVITSFIVAHCCARGRTSDSMVGSEIGKRKSGSSYGSEKKVYASGCVDSDGTTGTDQSRLVFFDRRSRFELEDLLRASAEMLGKGSLGTVYKAVLDDGCTVAVKRLRDANPCAWKEFEQYMDVIGKLKHPNIVRLRAYYYAREEKLLVYDYLPNGSLHYLLHGNRGPGRIPLDWTTRISLVLGAARGLARIHAEYSAAKIPHGNIKSSNVVLDKNGVACISDFGLSLLLNPVHAIARLSGYRAPEQEDSKKLSQQADVYSFGVLLLEVLTGKTPSQEPSPTRPRLVDDEQTVDLPKWVRSVVKEEWTAEVFDQELLRYKNIEEELVSMLHVGLSCVVAEAEKRPSMAEVVKMIEEIRVEQSPLGEDYDESRNSLSPSLPTTEDGLA 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0882 688 FunFam Nuclear pore complex protein NUP107 39 194 - -
Acco06g0882 688 Gene3D Transferase(Phosphotransferase) domain 1 454 675 - -
Acco06g0882 688 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 26 660 IPR046959 -
Acco06g0882 688 MobiDBLite consensus disorder prediction 247 284 - -
Acco06g0882 688 SUPERFAMILY L domain-like 41 237 - -
Acco06g0882 688 Gene3D Ribonuclease Inhibitor 123 245 IPR032675 -
Acco06g0882 688 MobiDBLite consensus disorder prediction 259 277 - -
Acco06g0882 688 CDD STKc_IRAK 384 658 - -
Acco06g0882 688 FunFam pollen receptor-like kinase 1 349 453 - -
Acco06g0882 688 Gene3D Phosphorylase Kinase; domain 1 350 453 - -
Acco06g0882 688 SUPERFAMILY Protein kinase-like (PK-like) 382 656 IPR011009 -
Acco06g0882 688 ProSiteProfiles Protein kinase domain profile. 378 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0882 688 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 454 667 - -
Acco06g0882 688 Pfam Protein kinase domain 382 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0882 688 Gene3D Ribonuclease Inhibitor 35 122 IPR032675 -
Acco06g0882 688 MobiDBLite consensus disorder prediction 663 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0882 Acco-ChrAcco06 5877019 5879329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0882 35 684 Receptor kinase-like Gene Family AT2G36570 65.821 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco06g0882 Pkinase 1.7e-34 CL0016