Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0880 ATGGAACACAATGGACTAGGTGGTGGAATTTTCCCTGGCTTGAGCTCTGGAATGTTAGGAGTGGATAACTCTTCACAGCAGCAAAACCTCTCCAATCATCAAAACCCTCACCATCTTCATACTAATCCCCAAATGGTTTCCTACGCTACCCACCACGACCTCGATCCCCACTCACAGGCCAAACATGGCGGCTACCCTTATTCCACCAAGAACACTGCGCCCCTCAGCGACGAAGAAGAGCCTGAGTTTGCGGCCGATGACAGCTCCGGCGACCCCAAGAGCAAAAACACGTCACCCTGGCAGAGAATGAAGTGGACAGACACTATGGTTAGGCTGTTGATAATGGCGGTTTATTACATTGGCGACGAAGCTGTTTCGGAAGGGACAGACGCTAATCCCGGCAAGAAGAAGCCGGCGGGGTTGTTGCAGAAGAAAGGGAAGTGGAAATCGGTGTCGAGGGCTATGATGGAGAAAGGCTTCTACGTGTCCCCTCAGCAATGTGAGGACAAGTTCAATGACCTCAACAAGAGGTACAAGAGGGTGAATGATATTCTGGGCAGAGGAACGGCCTGCAAAGTAGTGGAAAACCAGAGCTTGCTCGACACCATGGATTTGTCTCCCAAGATGAAAGAAGAAGCGCGAAAATTACTCAATTCAAAGCATCTTTTCTTCCGGGAAATGTGTGCCTACCATAACAGCTGCGGTCACGGTATCGCCAGTGGGGCCTCCCCTGCCCAACCATCGCCAGAGGTCGGGACAGATCATCATCCGGCGACGGCGGCGGCACCTCTCCGGCAACAATGTTCTCACACTACAGAAAATGGACTGAGGGTGGTGGGAAGCGTGGAAGATGACTCCGATTCCGATTCGGAGTCGGAGTCGGAGGCATGTTCCGAAGAGGAAGAGGATGAGTCGGTAGAAGGTCAAAATGGTGGGCAAGAACAAGAGGAGGAGGATGAGATGAAGGAAGGGACGGGGAGATCAAGCCGGAAGAGAAAGAGGAAAGCGGCGGCGGCGGGGCAGGGGATGCAGCAGCTGAGCGGGGAGGTGAGGGTGGTGTTGGAGGACGGAGGGAAGAGCACGTGGGAGAAGAAGCAGTGGATAAAGACGAAGCTAATTCAAATGGAAGAACAGCAAGTGAGGTATAAGATGAGGGCGTTTGATCTGGAGAAGCAGAGGCTGAAGTGGGCCAGGTTTAGCAGCAAGAAGGAGAGAGAAATGGAGAGAGCTGAGCTTGAAAACGAAAGGAGGAATCTGGAAACTGAAAGAATGCTTCTCATGATTCGCCAGAAAGAGCTTGAACTCCTCTCTCTTCACCAGCATCAGCAGCAGAATTCTTCCAACTAG 1347 0.5219 MEHNGLGGGIFPGLSSGMLGVDNSSQQQNLSNHQNPHHLHTNPQMVSYATHHDLDPHSQAKHGGYPYSTKNTAPLSDEEEPEFAADDSSGDPKSKNTSPWQRMKWTDTMVRLLIMAVYYIGDEAVSEGTDANPGKKKPAGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGRGTACKVVENQSLLDTMDLSPKMKEEARKLLNSKHLFFREMCAYHNSCGHGIASGASPAQPSPEVGTDHHPATAAAPLRQQCSHTTENGLRVVGSVEDDSDSDSESESEACSEEEEDESVEGQNGGQEQEEEDEMKEGTGRSSRKRKRKAAAAGQGMQQLSGEVRVVLEDGGKSTWEKKQWIKTKLIQMEEQQVRYKMRAFDLEKQRLKWARFSSKKEREMERAELENERRNLETERMLLMIRQKELELLSLHQHQQQNSSN 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0880 448 MobiDBLite consensus disorder prediction 285 319 - -
Acco06g0880 448 PANTHER F16F4.11 PROTEIN-RELATED 1 437 - -
Acco06g0880 448 Coils Coil 400 429 - -
Acco06g0880 448 MobiDBLite consensus disorder prediction 279 344 - -
Acco06g0880 448 MobiDBLite consensus disorder prediction 18 41 - -
Acco06g0880 448 MobiDBLite consensus disorder prediction 54 100 - -
Acco06g0880 448 MobiDBLite consensus disorder prediction 17 41 - -
Acco06g0880 448 Pfam Myb/SANT-like DNA-binding domain 102 229 IPR044822 -
Acco06g0880 448 Gene3D - 105 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0880 Acco-ChrAcco06 5834713 5836059 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco06g0880 Myb_DNA-bind_4 1.2e-22 CL0123