Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0877 ATGACTGCAAGGATGAAGCGGACACCTCACTTACGAAGAATTATTAAGGGAAGGAAGTCTTATATTATGGGAGACAATCGCGAAGATGATCGGACTGAGAGCAGCGATTTCACTTCAGAGGACGAAGGCAGCGAGGACTATCGACGGGGAGGTTACCACGCTGTGCGAGTCGGCGATACCTTCAAGAATGGTCGCTATGTTGTTCAGAGCAAACTCGGCTGGGGGCATTTCTCCACCGTCTGGCTCGCCTGGGACATCCAACTTTCTAGATACGTGGCCCTGAAAGTTCAAAAGAGCGCTCAGCATTACACAGAGGCAGCCATGGACGAGATAACCATTTTGCGACAGATTGCAGAAGGAGACCCAGAAGATAAAAAGTGTGTGGTGAAGCTTTTGGATCACTTCAAGCATTCAGGTCCCAATGGACAACATGTTTGTATGGTATTTGAATACCTTGGGGATAATCTTTTAACGCTTATCAAGTATACTGATTACCGAGGATTGCCAATCAACATGGTTAAAGAGATATGCTTTCACATTTTGGTTGGATTGGATTACTTACATAAGCAACTTTCTATAATACATACTGACTTGAAGCCTGAGAACATCCTCTTATTATCAATGATAGATCCATCTAAAGATCCTAGAAAGTCTGGCGCTCCCTTAATTCTACCAAATGCTAAAGATAAAACAGCTCTCGAATTGGGAATTGGGAAGGAAGTGAAAACATCAAATGGGGAATTAATGCGGATTCATAAGAAAAAGATTAAAAGGAAAGCTAAGCAGGCAGCACAGGGATGTGTAGAGATGGAAGCTTCCGAGGAAGTTGAGGGGGATCCTGAAACATCTGGTGCCGCAGAATCCTCTGCAAATGCAATAAAAAATGCAGGTTTTGCAGGAGAACAACCTTCTAGTTCTACAGGGACCAATAGTTTATCAGATGACGATGGGACAAAGGTAAACTGGTCAAAAAACCAGGGTAACAAAAGAGGAAGCCGGTCATTGAGGCAGAACTTACTGAAATCAGTTGACCTCAACTGCAAATTAGTTGACTTTGGCAATGCTTGTTGGACGTATAAACAGTTTACAAATGATATTCAGACAAGACAATATCGGTGTCCAGAAGTGATCCTTGGATCAAAATATTCAACGTCAGCAGATCTTTGGTCCTTTGCTTGCATTTGTTTTGAGCTTGCAACTGGTGATGTGCTATTTGATCCTCATAGTGGTGACAATTTTGATAGAGACGAGGATCACTTGGCACTAATGATGGAGCTTCTGGGCATGATGCCACGTAAGATTGCATTAGGGGGCCGTTACTCCCGTGATTTTTTCAATAGATATGGTGACCTGAGGCACATCCGCCGTCTGCGTTTCTGGCCCTTGAACAAAGTTCTTGTGGAGAAATATGATTTCAATGAGCGAGATGCCAGTGACTTGGCCGACTTTTTGGTTCCTATTCTAGACTTTGTTCCTGAGAAACGGCCAACGGCCGGTCAGTGCCTTCTGCATCAGTGGATCAATGCTGGTCCCCGCCTTCTGAAGCCATCCGTGCCATCTTCTAACCACAATTCAGCCGCAGATGGCTCTATTTCTGACCAAAAGAAAAAGGATAAGGATGATAGAGAGGCCATGGAGGCAGGGATGGGAAATATTGTCATCAATTCAGATTCTAAACCACACACGGATTTATCAGCTAAAGCCTGTCAAAGCAGTCAGAAGTAG 1725 0.4406 MTARMKRTPHLRRIIKGRKSYIMGDNREDDRTESSDFTSEDEGSEDYRRGGYHAVRVGDTFKNGRYVVQSKLGWGHFSTVWLAWDIQLSRYVALKVQKSAQHYTEAAMDEITILRQIAEGDPEDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGDNLLTLIKYTDYRGLPINMVKEICFHILVGLDYLHKQLSIIHTDLKPENILLLSMIDPSKDPRKSGAPLILPNAKDKTALELGIGKEVKTSNGELMRIHKKKIKRKAKQAAQGCVEMEASEEVEGDPETSGAAESSANAIKNAGFAGEQPSSSTGTNSLSDDDGTKVNWSKNQGNKRGSRSLRQNLLKSVDLNCKLVDFGNACWTYKQFTNDIQTRQYRCPEVILGSKYSTSADLWSFACICFELATGDVLFDPHSGDNFDRDEDHLALMMELLGMMPRKIALGGRYSRDFFNRYGDLRHIRRLRFWPLNKVLVEKYDFNERDASDLADFLVPILDFVPEKRPTAGQCLLHQWINAGPRLLKPSVPSSNHNSAADGSISDQKKKDKDDREAMEAGMGNIVINSDSKPHTDLSAKACQSSQK 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0877 574 CDD STKc_SRPK 55 507 - -
Acco06g0877 574 MobiDBLite consensus disorder prediction 298 333 - -
Acco06g0877 574 MobiDBLite consensus disorder prediction 555 574 - -
Acco06g0877 574 FunFam Serine/threonine-protein kinase SRPK-like protein 337 507 - -
Acco06g0877 574 MobiDBLite consensus disorder prediction 530 546 - -
Acco06g0877 574 FunFam CMGC/SRPK protein kinase 52 151 - -
Acco06g0877 574 ProSiteProfiles Protein kinase domain profile. 66 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0877 574 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 31 534 - -
Acco06g0877 574 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672|GO:0006468
Acco06g0877 574 ProSitePatterns Protein kinases ATP-binding region signature. 72 95 IPR017441 GO:0005524
Acco06g0877 574 Gene3D Transferase(Phosphotransferase) domain 1 149 508 - -
Acco06g0877 574 Pfam Protein kinase domain 337 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0877 574 Pfam Protein kinase domain 66 205 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0877 574 MobiDBLite consensus disorder prediction 515 529 - -
Acco06g0877 574 MobiDBLite consensus disorder prediction 514 574 - -
Acco06g0877 574 Gene3D Phosphorylase Kinase; domain 1 42 148 - -
Acco06g0877 574 SUPERFAMILY Protein kinase-like (PK-like) 60 518 IPR011009 -
Acco06g0877 574 MobiDBLite consensus disorder prediction 268 333 - -
Acco06g0877 574 SMART serkin_6 66 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0877 574 MobiDBLite consensus disorder prediction 25 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0877 Acco-ChrAcco06 5811081 5815091 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0877 23 559 EF-hand Containing Proteins AT5G22840 65.985 0.0 729
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Acco06g0877 Pkinase 5.9e-20 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0877 06 5811081 5815091 Acco06g0877 06 5811081 5815091 ECH