LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Acco06g0871	ATGTGGAAACTGTTGATAATCCCAATTCGTTTGACGACTGGTAACAACTTGGAGACACTTGGCATCATCCTTCTCAATAGTGTAGGTTGGAGCCTTGGACTTTGTCCTGTCTACATGGAACCTTTGCTTAAAATGATCACTGATCCAAAAGTAAGTTCACGTTACCAACTTAGCTATGTCCTCCTCCTTTTCTTTTTCCTTAGTCATCATTGTACTTCTCAAAAGACTTGCCCAAACTGCGGCTCCTTACAAATTCCATATCCTTTAAGCACAGACCCTACCTGTGGTGATCCATCCTATAGCCTTCACTGTGATCCCAAATCTAAAAAGCTCTACTTTGACACCCTCAATGGAAGTTCCTATTCTGTTATTAGAATTATGTCTTCGATCCAACGCTTGGTGGTGCAGCCATCATCTTGGCTTTCTAGTTCATGTGTTACTCAAGACATGCCCGTAAGTGGTGGCCTCTGGTTAAACCAGTCACTTCCTTTCAAAATAACTTCATCAAACACAGTCTTCCTCTTTAACTGCTCCCCTCGCCTGTTAGTTTCTCCTCTCAATTGCACTTCTTCTAGTCTTTGTCACCGTTACTTGGAGAGCTCAGGACATGTTGACAGTAAAAGAGCTTTCCAGTGTACTAGTGCTCTCGGCCTTTGTTGCACTTTTGTTGCTGGTGGGATGCCGTCAGCATACAAGATACGCCTTCATAGCTCTGGTTGTAAAGCATTCAGAAGCATCCTTCATTTACATGCAGACAAGCCTGCTTATCAGTGGGAGGAAGGCCTTGAAATTCAATGGGCTTCTCCTCCTGAACCTCTCTGCAGGACCCAAAAAGATTGCTCTGGAGCTTCTATTTGTTCCCCAGCTCAAAAAAATGGCGTCTTTCGCTGTCTTTGCAAGGGAGAATACCATTGGGACCCTATGGCTGCAACTTGCTTGAAGAACAAGAAAAAGTCTAGATCACATATCAGCTTAACAGTCTCGATTGTGGTTGTAACATTTTTCTGTCTAGCAACAGTTATGGCCATCATCTTAAGGAGGTCCTGGAAGCTCTCTTATGGGTCAAAGCAGGCCAAGACAATGGAAGATGTGATAAAGTCAAATTCTGGAGAGACACCTGCTAGGCTGTTTAAACTGAAGGAGGTGATGAAAATGACGAATGGATTTTCTAAGGACAGAGTTTTGGGGAACGGTGGGTTTGGGGAAGTCTACAGAGGTGAACTTCAAGATGGGACAGTTGTGGCTGTGAAGAAAGCTAGATTGGGCAACCTCAAAAGCATCCAACAGATATTAAACGAGGTTGCAATTCTTTCTCAAGTCAATCACAAGAACCTGGTCAGACTCATAGGTTGTTGTGTAGAATCTGAGCAGCCTCTGATGATCTATGAGTACATCTCAAATGGGACCCTCCATGACCATCTTCATGGCAGGTATTCGAACTTCCTAGAATGGAAAACGAGGCTGAAGGTTGCTTTTCAAACTGCTGAAGCATTGGCATATCTTCATTCTGCTGCACACACTCCCATTTACCACAGAGATGTGAAGTCCACAAACATACTGCTAGATGATGAATTTAACGCCAAAGTTGCAGATTTTGGACTCTCCAGATTGGCTAACCCAGGACTTAGTCATGTATCAACCTGTGCTCAGGGAACATTAGGCTACTTGGATCCTGAGTATTACCGCAACTACCAGTTAACTGATAAAAGTGATGTTTATAGTTATGGGGTTGTGTTGCTGGAGCTTTTGACGTCCCAGAAGGCCATAGATTTCTCAAGAGAGCAAGATGATGTAAACCTAGCAATTTTTGTTACTCAACATGCCAGCAACGGGTCAATCATGGAACTGGTAGATCAGAGGCTCCTAATGTCTAAGGAAACAGCTGATGATAAAGTGAAAACAAGCATACAACTTTTCTCAGATCTGGCACTCAGCTGCCTGAGGGAAAAGAAAGGCGAAAGGCCAAGTATGAAGGACATTGTTCAACACCTTCAATGCATCATTGAAATTGCAGATCAAGTGAGGAATAGTGATGATGTGTCAGTTTAA	2049	0.4324	MWKLLIIPIRLTTGNNLETLGIILLNSVGWSLGLCPVYMEPLLKMITDPKVSSRYQLSYVLLLFFFLSHHCTSQKTCPNCGSLQIPYPLSTDPTCGDPSYSLHCDPKSKKLYFDTLNGSSYSVIRIMSSIQRLVVQPSSWLSSSCVTQDMPVSGGLWLNQSLPFKITSSNTVFLFNCSPRLLVSPLNCTSSSLCHRYLESSGHVDSKRAFQCTSALGLCCTFVAGGMPSAYKIRLHSSGCKAFRSILHLHADKPAYQWEEGLEIQWASPPEPLCRTQKDCSGASICSPAQKNGVFRCLCKGEYHWDPMAATCLKNKKKSRSHISLTVSIVVVTFFCLATVMAIILRRSWKLSYGSKQAKTMEDVIKSNSGETPARLFKLKEVMKMTNGFSKDRVLGNGGFGEVYRGELQDGTVVAVKKARLGNLKSIQQILNEVAILSQVNHKNLVRLIGCCVESEQPLMIYEYISNGTLHDHLHGRYSNFLEWKTRLKVAFQTAEALAYLHSAAHTPIYHRDVKSTNILLDDEFNAKVADFGLSRLANPGLSHVSTCAQGTLGYLDPEYYRNYQLTDKSDVYSYGVVLLELLTSQKAIDFSREQDDVNLAIFVTQHASNGSIMELVDQRLLMSKETADDKVKTSIQLFSDLALSCLREKKGERPSMKDIVQHLQCIIEIADQVRNSDDVSV	682

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Acco06g0871	682	Gene3D	Transferase(Phosphotransferase) domain 1	465	681	-	-
	Acco06g0871	682	SMART	serkin_6	389	667	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g0871	682	FunFam	Adenine nucleotide alpha hydrolase-like domain kinase	362	464	-	-
	Acco06g0871	682	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	60	668	IPR044652	GO:0004672
	Acco06g0871	682	ProSiteProfiles	Protein kinase domain profile.	389	666	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Acco06g0871	682	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	509	521	IPR008271	GO:0004672\|GO:0006468
	Acco06g0871	682	FunFam	Wall-associated receptor kinase-like 20	465	677	-	-
	Acco06g0871	682	SUPERFAMILY	Protein kinase-like (PK-like)	365	665	IPR011009	-
	Acco06g0871	682	ProSitePatterns	Protein kinases ATP-binding region signature.	395	418	IPR017441	GO:0005524
	Acco06g0871	682	CDD	STKc_IRAK	395	665	-	-
	Acco06g0871	682	Gene3D	Phosphorylase Kinase; domain 1	350	464	-	-
	Acco06g0871	682	Pfam	Protein kinase domain	390	663	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Acco06g0871	Acco-ChrAcco06	5775385	5780248	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Acco06g0871	77	673	Receptor kinase-like Gene Family	AT5G02070	46.955	0.0	546

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Acco06g0871		Pkinase	9.5e-51	CL0016