Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0849 ATGGATCGTGAATGGGGTTCGAAGCCTGGCAGTGGAGGCGCTGCCTCCGCCCAGAACGAGGCCATCGACCGTCGTGAGCGTCTCCGCCGACTTGCGCTCGAGACTATTGATCTTGCTAAAGACCCCTATTTCATGCGCAATCATCTTGGCAGCTATGAGTGCAAGCTTTGTCTCACTTTGCACAATAATGAAGGGAATTATCTGGCGCACACACAGGGTAAGCGACATCAGACCAATTTGGCCAAGAGAGCAGCTCGCGAGGCCAAGGAGGCACCTGCTCAACCTCAGCCCCACAAGCGTAAAGTCTCAGTTCGCAAGACAGTGAAGATTGGTAGACCTGGGTACCGAGTGACCAAGCAATATGATCCAGAGACAAATCAGAGATCCCTTCTTTTCCAGATTGAATATCCTGAGATTGAAGACCTAACAAAGCCAAGGCATCGATTTATGTCTTCTTATGAGCAGAGAGTGCAACCCTTTGATAAAAGATATCAGTATCTTTTGTGCGCAGCTGAACCATATGAAACCATTGCTTTCAAGGTTCCCAGCACTGAGATTGATAAGACAACTCCAAAGTTTTTCTCACACTGGGACCCAGACACAAAGATGTTTACGTTGCAACTGTATTTCAAACCGAAGCCACCAGAGGCAAACAAACCCCAGCCTCCCTCAACAGCCAATAGCACTGCTGCACCTGGTGTCCCTCCACCACCTCAAGCTCCACCACCACCTCCTCCACCGCCCCAAGGCTTACCTCCTGGTGTGCCTCTTGGAAATCCTCCCAGGGCCCCTCCCCCTCCGATGCCTGGATCATTACCGCCGCCGCCGCCGCCGCCGCCTATGTCAAATGGCCCCAGACCGGCACATTCTATTGGCAGCAGCGTAACAGCAAATTTCAACATGGGCTCTAGGCCTCCATCTATGCCCCCTGGGCAAGGTTTTCCGGGACAACAAATGCAGGGCCAGGTTGCTCATCCTCCACCACCACCGCCTAGAATGGGGCAGTAG 1008 0.5278 MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKIGRPGYRVTKQYDPETNQRSLLFQIEYPEIEDLTKPRHRFMSSYEQRVQPFDKRYQYLLCAAEPYETIAFKVPSTEIDKTTPKFFSHWDPDTKMFTLQLYFKPKPPEANKPQPPSTANSTAAPGVPPPPQAPPPPPPPPQGLPPGVPLGNPPRAPPPPMPGSLPPPPPPPPMSNGPRPAHSIGSSVTANFNMGSRPPSMPPGQGFPGQQMQGQVAHPPPPPPRMGQ 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0849 335 SMART CactinC_cactus_3 89 217 - -
Acco06g0849 335 Pfam Pre-mRNA-splicing factor SF3a complex subunit 2 (Prp11) 110 204 IPR031781 -
Acco06g0849 335 SMART ZnF_U1_5 49 83 IPR003604 GO:0003676|GO:0008270
Acco06g0849 335 SUPERFAMILY beta-beta-alpha zinc fingers 48 83 IPR036236 -
Acco06g0849 335 Gene3D - 93 218 - -
Acco06g0849 335 Gene3D Classic Zinc Finger 46 89 - -
Acco06g0849 335 Pfam Zinc-finger of C2H2 type 52 76 - -
Acco06g0849 335 ProSiteProfiles Zinc finger matrin-type profile. 52 82 IPR000690 GO:0003676|GO:0005634|GO:0008270
Acco06g0849 335 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g0849 335 MobiDBLite consensus disorder prediction 229 285 - -
Acco06g0849 335 MobiDBLite consensus disorder prediction 287 305 - -
Acco06g0849 335 FunFam Splicing factor 3a subunit 2 94 218 - -
Acco06g0849 335 MobiDBLite consensus disorder prediction 212 335 - -
Acco06g0849 335 PANTHER SPLICING FACTOR 3A SUBUNIT 2 1 331 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0849 1 287 C2H2 Transcription Factor Family AT2G32600 77.003 8.66e-136 385