Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0823 ATGGGCAGAGCCCCTTGTTGTGACAAGGCAAATGTGAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCTAAGCTAAAGGAGTATATGGAGAAACATGGGACTGGTGGAAACTGGATTACACTCCCTCAAAAAGCTGGTTTGAAAAGATGTGGGAAAAGTTGCAGACTAAGATGGCTTAACTATCTCAGACCCAACATTAAGCACGGCCAGTTCTCTGATGATGAAGATAGAATCATTTACAGCCTCTTTGCTAGCTTTGGAAGCAGGTGGTCGATAATAGCAGCTCATTTACCTGGGAGGACAGACAATGATATCAAGAATTATTGGAATACCAAGCTTAAGAAGAAAGTGATGCTTATGAATCCTTCAGTTAAAGGGAATAAGCCTCAGCATCATCAACATCAACATCAACAACCTAACCTTTTAACCATTCTTCAAAACTCGACACCTGCTCCACCACCATCATTCTCAGACAGCCCCAACTCTTACTACCACCATGCTAATGTCCCTTTCATAGGCTCTTCCAATTTTTTGACTGGTAACGCTTCTGCCCCTAACTTCAATTTTCAACCCCAGGACATTACTTTCATGGGACACAACCAAAATCACCCAGTTTCTATGGCTCGTGGTGAGCCTTCTAGTTGCAGCTCTTCTGATGGAAGCTGCAATAACAACCAGATCACTCATATCAAAGAAACAGAGTTTGTGTACGGAAGAGATGAAACTTTAATGCAACAGGTTGGTGGTGCGCATAATTATTATCTCAACAATGGATTGTGGGGAGAGAGTTTATTGGATTATGGGATGGATGAGATTAAACAATTAGCAAGCACAGATAATTGCAGCAACTTGTTTTTCGATGAGAAGAAAACAGGGGAAAAGGTTGTGTACTATTGA 897 0.4181 MGRAPCCDKANVKKGPWSPEEDAKLKEYMEKHGTGGNWITLPQKAGLKRCGKSCRLRWLNYLRPNIKHGQFSDDEDRIIYSLFASFGSRWSIIAAHLPGRTDNDIKNYWNTKLKKKVMLMNPSVKGNKPQHHQHQHQQPNLLTILQNSTPAPPPSFSDSPNSYYHHANVPFIGSSNFLTGNASAPNFNFQPQDITFMGHNQNHPVSMARGEPSSCSSSDGSCNNNQITHIKETEFVYGRDETLMQQVGGAHNYYLNNGLWGESLLDYGMDEIKQLASTDNCSNLFFDEKKTGEKVVYY 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0823 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Acco06g0823 298 CDD SANT 71 113 IPR001005 -
Acco06g0823 298 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Acco06g0823 298 SMART sant 67 115 IPR001005 -
Acco06g0823 298 SMART sant 13 64 IPR001005 -
Acco06g0823 298 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Acco06g0823 298 FunFam Transcription factor RAX3 7 68 - -
Acco06g0823 298 CDD SANT 16 62 IPR001005 -
Acco06g0823 298 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Acco06g0823 298 PANTHER OS09G0431300 PROTEIN 1 246 - -
Acco06g0823 298 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Acco06g0823 298 Gene3D - 69 142 - -
Acco06g0823 298 Gene3D - 7 68 - -
Acco06g0823 298 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Acco06g0823 298 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0823 Acco-ChrAcco06 5443897 5446050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0823 1 118 MYB Transcription Factor Family AT5G57620 85.593 3.63e-74 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g0823 Myb_DNA-binding 5.7e-14 CL0123