Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0807 ATGTTAGCGGTTTCAAAGCTCTGTATTTTAAATTTGAATACCTTGAAGAGGACTCACTCGGGTTCTCTGAATGTTTTTGACGTTTTTGCTATTGCTAAAATCTGTGAATCCAATAATTTTCCAATGAAGTGCTTTTCATGCTACTACGGAGTTAAGCAGGATGATCCGAAGAGCATTAAGTCCATTTCGGGTCTGTCTAACTATTCCGCGTATGGCGAGTGTGATCTGAGAAGATCTGGCTCTGAATTAAATTCTCAGAATGTTTCCGACAATAGCACAGACTCCCTTAGGAGAACTTCGTTTCCCAGTTTGTCTCAAAGAACCAGCAACCTGAGAGTGTTTACTGTGTCTGAACTGAAATCAGCCACTAAAAATTTTGGCCGCACTGTTATGATTGGAGAGGGTGGGTTTGGCTGTGTCTACAAGGGATTGATCAAGAGCTTAGAGGACCCATACAAAAAAATTGAAGTTGCAGTTAAGCAACTTGGTAGAAGAGGAATGCAGGGCCATAAGGAATGGGTAACAGAAGTGAATGTTCTTGGCATTGTTGAGCATCCTACTCTTGTGAAACTTGTGGGTTACTGTGCTGAGGATGATGAAAGAGGAATCCAACGACTTTTGGTTTATGAATATATGCCCAACAGAAGTGTGGAGCACCATTTATCCCCCCGATCGGAGACCCCTCTCTCATGGAATAGGAGATTAAAAATAGCTCAGGATGCAGCTCGTGGCTTAACATATCTTCATGAAGAAATGGATTTTCAGATAATCTTTAGAGATTTCAAATCTTCCAATATACTTTTGGACGATCAGTGGAATGCAAAGCTTTCAGATTTTGGATTAGCTAGATTGGGTCCATCAGAAGGGTTAACTCACGTCTCAACGGCGATTGTGGGAACAATGGGATACGCTGCTCCTGAATATATTCAAACTGGACGTCTTACGTCAAAAAGTGATGTGTGGAGTTATGGCGTATTTCTCTATGAACTCATCACTGGCAGGCGCCCTGTGGATCGAAATCGTCCCAAGGGCGAACAAAAGCTCTTGGAGTGGGTAAGGCCGTATCTATCATCAGATGGGAAAAAATTTCAACTAATATTGGATCCAAGGCTTGACAGGAAACCCCTCTTCAAGTCAGCACAGAGACTTGCTGTTATAGCTAACCGATGCTTGGTCAAAAACCCAAAGAATCGCCCAAAAATGAGTGAGGTGTTGGAAATGGTGAATCGACTTGTAGAATCTTCGACTGCCACTAGTCCACTGATACCCCTGAAGAGTTCAGAATCCACTGAAGTTTCGCAGGGCACTGAAACCAAGAAAAAGAGGAGTGTCATGGATCTAAAACCTGGAGAAAATAGTTGGTTTGTTTGGTTGTGGAGACCAAAGCTTTTAAAAGTATGTTGA 1404 0.4231 MLAVSKLCILNLNTLKRTHSGSLNVFDVFAIAKICESNNFPMKCFSCYYGVKQDDPKSIKSISGLSNYSAYGECDLRRSGSELNSQNVSDNSTDSLRRTSFPSLSQRTSNLRVFTVSELKSATKNFGRTVMIGEGGFGCVYKGLIKSLEDPYKKIEVAVKQLGRRGMQGHKEWVTEVNVLGIVEHPTLVKLVGYCAEDDERGIQRLLVYEYMPNRSVEHHLSPRSETPLSWNRRLKIAQDAARGLTYLHEEMDFQIIFRDFKSSNILLDDQWNAKLSDFGLARLGPSEGLTHVSTAIVGTMGYAAPEYIQTGRLTSKSDVWSYGVFLYELITGRRPVDRNRPKGEQKLLEWVRPYLSSDGKKFQLILDPRLDRKPLFKSAQRLAVIANRCLVKNPKNRPKMSEVLEMVNRLVESSTATSPLIPLKSSESTEVSQGTETKKKRSVMDLKPGENSWFVWLWRPKLLKVC 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0807 467 MobiDBLite consensus disorder prediction 81 100 - -
Acco06g0807 467 Gene3D Phosphorylase Kinase; domain 1 98 211 - -
Acco06g0807 467 SUPERFAMILY Protein kinase-like (PK-like) 100 408 IPR011009 -
Acco06g0807 467 CDD STKc_IRAK 132 411 - -
Acco06g0807 467 ProSitePatterns Protein kinases ATP-binding region signature. 132 160 IPR017441 GO:0005524
Acco06g0807 467 FunFam Serine/threonine-protein kinase BIK1 92 211 - -
Acco06g0807 467 Gene3D Transferase(Phosphotransferase) domain 1 212 424 - -
Acco06g0807 467 ProSiteProfiles Protein kinase domain profile. 126 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0807 467 PANTHER OS01G0588500 PROTEIN-RELATED 92 410 - -
Acco06g0807 467 FunFam Serine/threonine-protein kinase PCRK2 212 420 - -
Acco06g0807 467 Pfam Protein tyrosine and serine/threonine kinase 131 406 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0807 Acco-ChrAcco06 5310060 5312768 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0807 42 405 Glycoside Hydrolase AT3G07070 43.236 1.09e-90 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Acco06g0807 PK_Tyr_Ser-Thr 9.4e-47 CL0016