Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0799 ATGGAAGCCGTTGCTAACGTCAAAGCCACTGCCGATAGCTTCTGTCTGAACGGTGGAGTAGCTGCCGCGGACCCACTCAACTGGGGTGTCGCCGCCGAATCACTCAAGGGCAGTCACTTGGACGAGGTGAAGCGAATGGTGGATGAGTTCCGGAAGCCGGTGGTCCGCCTTGGTGGCGAGACCCTCACCATCTCCCAGGTGGCCGCCATCGCCGCCCACGACGACCAAGTTGTCAAGGTGGAGCTATCGGAGTCGGCCAGGGCTGGCGTTAAGGCCAGCAGTGACTGGGTCATGGACAGCATGAATAAAGGCATGGATAGCTACGGTGTCACCACCGGCTTCGGTGCTACTTCCCACCGGCGAACCAAACAAGGCGCTGCTCTGCAGAAAGAGCTTATCAGATTCTTGAATGCTGGAATATTTGGCAATGGCACAGAGTCATGCCACACTCTGCCACACTCAGCAACCAGAGCCGCCATGCTGGTCAGAATCAACACTCTCCTGCAAGGCTACTCCGGCATTAGATTCGAGATCCTGGAAGCTATCACCAAGTTCCTCAACCACAACATCACTCCATGTTTGCCCCTTCGCGGTACAATCACCGCCTCTGGCGATCTCGTTCCTCTTTCTTACATCGCTGGTTTGCTCACTGGCCGACCCAACTCTAAAGCCGTTGGACCCTCCGGTGAACTCCTCACTCCCAAGGAAGCCTTTCAATTGGCCGGCATTGATTCCGACTTCTTCGAATTACAACCCAAGGAAGGCCTTGCCCTCGTCAATGGTACCGCCGTTGGCTCTGGCTTAGCTTCCATGGTTCTGTTCGAGGCCAACATTTTGGCCGTGCTATCTGAAGTTCTATCGGCGATTTTTGCTGAAGTGATGCAAGGGAAGCCTGAATTTACAGACCATTTGACACATAAATTAAAGCACCACCCTGGTCAAATCGAAGCTGCTGCTATAATGGAACACATTCTTGATGGAAGCTCATACGTGAAAGCTGCTCAAAAGTTGCATGAGATTGATCCCCTGCAGAAGCCTAAACAAGATCGTTACGCACTTCGAACTTCACCCCAATGGCTGGGTCCTCTCATTGAGGTAATCAGATTCTCTACCAAATCCATCGAGAGGGAGATCAACTCTGTGAACGACAACCCTTTGATTGATGTTTCAAGGAACAAGGCCCTACACGGAGGTAATTTCCAAGGAACCCCAATTGGAGTCTCCATGGACAATACCCGTTTGGCTCTCGCGTCTATAGGGAAACTCATGTTCGCTCAATTTTCTGAGCTGGTCAATGATTTTTATAACAATGGGCTACCTTCAAATCTCTCTGCGGGTAGAAACCCCAGCTTGGACTATGGTTTCAAGGGTGCTGAAATCGCTATGGCATCTTACTGCTCTGAACTTCAATATCTTGCAAACCCAGTAACAAGCCACGTCCAGAGTGCTGAGCAACACAATCAGGATGTCAACTCATTGGGTTTGATTTCATCTCGAAAAACCAATGAGGCCATTGAAATCTTGAAGCTCATGTCTTCCACATACCTCATTGCACTTTGCCAAGCAATTGACCTGAGGCATCTGGAGGAGAACTTGAAGGGCACAGTGAACAGTACGGTGAGTCAAGTCGCAAAGAGAACTCTCACCATAGGGGTAAACGGAGAACTCCATCCTTCTAGATTTTGTGAGAAAGATTTGTTGAAAGTGGTGGATAGGGAGCACGTATTTGCCTACATTGATGACCCCACCAGTGCTACATACCCATTGATGCAGAAACTGAGGCAAGTTCTGGTTGATCATGCACTAGAGAATGGCGATAATGAGAAGAACTCAAGCACCTCGATCTTCCAGAAGATTGCGGCTTTTGAGGAGGAATTGAAGACTGTGTTGCCAAAGGAAGTAGAGAAAGCAAGAACTACATACGAGAACGGAAATTCATCAGTCCCAAACAAGATCAAGGAATGCAGATCGTACCCATTGTACAAGTTTGTGAGAGAGGATCTGGGAGCTGGGCTACTTACTGGAGAGAAGATAAGATCACCAGGTGAAGAGTGTGACAAAGTGTTCACGGCTTTATGTCAAGGAAAGATTATCGATCCTCTTCTGGAATGCCTTGGGGAGTGGAATGGCTCTCCTCTTCCTATCTGTTAG 2151 0.4928 MEAVANVKATADSFCLNGGVAAADPLNWGVAAESLKGSHLDEVKRMVDEFRKPVVRLGGETLTISQVAAIAAHDDQVVKVELSESARAGVKASSDWVMDSMNKGMDSYGVTTGFGATSHRRTKQGAALQKELIRFLNAGIFGNGTESCHTLPHSATRAAMLVRINTLLQGYSGIRFEILEAITKFLNHNITPCLPLRGTITASGDLVPLSYIAGLLTGRPNSKAVGPSGELLTPKEAFQLAGIDSDFFELQPKEGLALVNGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLSAGRNPSLDYGFKGAEIAMASYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISSRKTNEAIEILKLMSSTYLIALCQAIDLRHLEENLKGTVNSTVSQVAKRTLTIGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPTSATYPLMQKLRQVLVDHALENGDNEKNSSTSIFQKIAAFEEELKTVLPKEVEKARTTYENGNSSVPNKIKECRSYPLYKFVREDLGAGLLTGEKIRSPGEECDKVFTALCQGKIIDPLLECLGEWNGSPLPIC 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0799 716 FunFam Phenylalanine ammonia-lyase 15 262 - -
Acco06g0799 716 FunFam Phenylalanine ammonia-lyase 529 650 - -
Acco06g0799 716 SUPERFAMILY L-aspartase-like 24 716 IPR008948 GO:0003824
Acco06g0799 716 NCBIfam phenylalanine ammonia-lyase 24 705 IPR005922 GO:0005737|GO:0006559|GO:0016841
Acco06g0799 716 Gene3D Fumarase/aspartase (Central domain) 263 710 - -
Acco06g0799 716 FunFam Phenylalanine ammonia-lyase 263 551 - -
Acco06g0799 716 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 198 214 IPR022313 GO:0016841
Acco06g0799 716 CDD PAL-HAL 60 526 IPR001106 -
Acco06g0799 716 Gene3D - 529 650 IPR023144 -
Acco06g0799 716 Pfam Aromatic amino acid lyase 62 531 IPR001106 -
Acco06g0799 716 Gene3D - 15 262 IPR024083 -
Acco06g0799 716 PANTHER HISTIDINE AMMONIA-LYASE 18 716 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0799 Acco-ChrAcco06 5267259 5270066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0799 20 716 Monolignol Biosynthesis Gene Families AT2G37040 83.931 0.0 1241