Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0790 ATGGGCAACTGTTGCATTACTCCATTTCGCACTGAGGAAAAGAAAAAGAAGGGGTATAAAAATAAACTGAACGCTTTTGGGATTGATTTCGGTCGAAACCACGGAAATGGCAGAAGCAAGAATAACGTCTTGAAGGAGCCTACGGGCCGCGAAATTGAGCTGGGTGACGAGCTCGGAAGAGGGGAATTCGGAATCACTTACCTATGCACCGATAAACAGACTGGTGAGAATTTCGCTTGTAAATCGATATCGAAGAAGAAGCTGAGAACACCCATTGATATCGAGGATGTTAGGAGAGAGGTTGAGATCATGAAGCATTTGCCAGAGCATCCAAGAACTTAA 342 0.4444 MGNCCITPFRTEEKKKKGYKNKLNAFGIDFGRNHGNGRSKNNVLKEPTGREIELGDELGRGEFGITYLCTDKQTGENFACKSISKKKLRTPIDIEDVRREVEIMKHLPEHPRT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0790 113 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Acco06g0790 113 ProSiteProfiles Protein kinase domain profile. 52 113 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0790 113 PANTHER SERINE/THREONINE-PROTEIN KINASE 23 111 - -
Acco06g0790 113 Gene3D Phosphorylase Kinase; domain 1 39 113 - -
Acco06g0790 113 Pfam Protein kinase domain 54 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0790 113 SUPERFAMILY Protein kinase-like (PK-like) 48 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0790 Acco-ChrAcco06 5206132 5206473 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0790 1 111 EF-hand Containing Proteins AT5G19450 60.345 6.12e-38 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Acco06g0790 Pkinase 2.6e-09 CL0016