Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0788 ATGTTGCATGTCCTCTTTATTGCATCTTTAAACCGGATTCAGTGGCAGCATACTCGGCGTCCATGTGGTCCAATATTTTGCTATAGTCAATATCGTTGATTGTCAAAATGGCGATCCGGACCACGTTCTTCCATCCTCCCCATCATCACTCTCACAACTCTGACTGCAGCAAACAACTATTTAACGAGCATCGAGCTGTTTCATTCCGTTCCAAACCCATTGTCCTCAACCCTCTGCAGGACCATGCAAGTCCTCTATGCACATAGCCTTCGAGGGATTTCTTCTCCTGTCTTCCTTCAGCTAATTCTGCTCTTCTTATGTTCATCTTGCGGACATGGGTTTGGTACGATGGGCCCATTATCGGCCTCATTTGGTAAAGACGAATTCTTTTGCGCCATCGATGCAAGTGGGAAGCAGGATGTCATTTGCTGGGGCAAGAACAACACTTCATCGGTTCCACCTTCTTCTTCAGCTTCAGCTTCAGCTTCTGTTACTGACAACCCTCCCATGGCATCTTTATCCGGTGGCGAAGGGTTTATGTGCGGCATTCAAGCAAGCACTTCGCAAGCATATTGCTGGAGCGCCACAAAACCAACAATAGATCTTGTGCCTCCTGCATACCAATCCTATGCTTACTCTCAAATTGCAGCAGGTAAAAATCATGTTTGTGCCATCAGGGGATCTTATTATTCTAATGAAGATTCCGGAATTGTTGATTGTTGGGAAATTGTAAGAACTTCGGACAACAGCTTAAAATGGAAACAGAGCGATTTGTATTACGATCAGTCAACTAGCAATCTGGCATTAAACAAAATTGTAGCAGGTGAGGGATTTTCTTGTGGTGCGGTCAGAGACGGCGGGCTTGTCTGTTGGGGACCTACATCAACGAGCTTAGGGGTATCGAATGTGTCTGAGAAATTCTCAATCTTGGTTTCGGGAAGGAGTTCAGTTTGTGGGCTTTTGAACGTTTCTGGAGATTTGAAATGTTGGGGTGACAAAGATTCGTTTGCTGATCCACCTGATGGGACTCGGTTAATCTCTCTGTCAGCCGGGGGTCACTATTATTGTGGTATTCGAGCAGATAATCATATAGTGGAGTGCTGGGGCAGTTTCAATTCTTCTGCGGTTCCAAAAGCTTCTGGATTTATGGCAATTGCTTCTTCAGATTATAGAGCTTGTGGCGTTAGAGAAGAAGATCTTCTCATTGATTGCTGGTTGGTGAATGAGTCAACGGCCGAGTTTGATCCTCCATTGGAATTATCAAGTCCAGGTCTCTGCAGTTCCAGTTCATGCGGTCCAGCTGAGTTTGCTTTCAATGTTAGTAATCTAAATGAGCCAGGCTTAACAAGCCTCTGTGTTCGAAAAGATTTGAGGATCTGTTCGCCCTGTGGCTCAAATTGTTCACAAGGCTTTTTCTTGTCCAGTCCTTGCACTGAGAATTCCGATAGAGTATGCACTGCTTGTTCTCTTTGCCAAAATGGCTCCTGCTGGGATGTGTGTCGACATGAGTCATCTCCAGATGTTGTTCATAAGAAAAAATGGCATCATTTGCGTCGGTTATTGATCATAATTGGCTCAGCTGCTCTGGGATTCTTGTTCATCATAACTTGTGGGTGTATTCTTCCATGTTTGATCACTAAGAAAGAGGCCAAATCTGGTACGGCCAAACTAGAACAGCAAGCTGATCATAATATTGATCTTCACTCATTTCCTTCAACAACTTCCTGTCCCGGGATGCCTCAGATTTTCAGACTCTCTGAGTTAAAGGATGCAACTAATGGGTTCAAGGAATTCAACGAGCTTGGTAGAGGAAGTTATGGCTTTGTATACAAAGCCGTATTAGCAGATGGCAGGGTAGTTGCAGTGAAGAGGGCCAATGCTGCAACAATTATTCACACAAACAATCGTGACTTTGAAATGGAACTGGAGATCCTCTGCAAAATCCGTCACTGTAATATAGTGAACTTGTTGGGTTACTGTGCAGAGATGGGGGAGAGGCTTCTTGTTTACGAGTATATGCCGCATGGAACTCTTTATGATCACCTTCATGGTGGGCTTTCTCCTCTGAATTGGAGCCTCAGGTTGAAGATAGCAATGCAAATTGCAAAAGGTCTTGAGTATCTCCATAAGGAACTAGCTCCACCAATTGTGCACAAGGATCTCAAAAGTTCAAACATTCTCTTGGATTCTGAATGGGGAGCGAGAATTTCAGACTTTGGACTCCTCACTTGTGGTGACAAAGATCAAAATGGGAATGTGCAGAGCGATGTTTACAACTTTGGGATTGTGTTGCTTGAGATTCTAAGTGGAAGAAAAGCTTATGATGGAGATTTTGTGCCTCCCAGCATAGTTGAGTGGGCAGTGCCTCTGATAAAACAGGGGAAAGCAGCTGCTATAATTGACCGCTCTGTTCCTCTTCCAAGGATCGTTGAGCCTTTGCTGAAGCTAGCTGATATAGCAGAGCTTGCCGTGAGACACAATCCTGGCGAGCGTCCGGTGATGTCAGAGATAGCATCTTGGTTGGAGCAGATTGTGAAGGATGGTTTGATCTTATAG 2556 0.446 MLHVLFIASLNRIQWQHTRRPCGPIFCYSQYRXLSKWRSGPRSSILPIITLTTLTAANNYLTSIELFHSVPNPLSSTLCRTMQVLYAHSLRGISSPVFLQLILLFLCSSCGHGFGTMGPLSASFGKDEFFCAIDASGKQDVICWGKNNTSSVPPSSSASASASVTDNPPMASLSGGEGFMCGIQASTSQAYCWSATKPTIDLVPPAYQSYAYSQIAAGKNHVCAIRGSYYSNEDSGIVDCWEIVRTSDNSLKWKQSDLYYDQSTSNLALNKIVAGEGFSCGAVRDGGLVCWGPTSTSLGVSNVSEKFSILVSGRSSVCGLLNVSGDLKCWGDKDSFADPPDGTRLISLSAGGHYYCGIRADNHIVECWGSFNSSAVPKASGFMAIASSDYRACGVREEDLLIDCWLVNESTAEFDPPLELSSPGLCSSSSCGPAEFAFNVSNLNEPGLTSLCVRKDLRICSPCGSNCSQGFFLSSPCTENSDRVCTACSLCQNGSCWDVCRHESSPDVVHKKKWHHLRRLLIIIGSAALGFLFIITCGCILPCLITKKEAKSGTAKLEQQADHNIDLHSFPSTTSCPGMPQIFRLSELKDATNGFKEFNELGRGSYGFVYKAVLADGRVVAVKRANAATIIHTNNRDFEMELEILCKIRHCNIVNLLGYCAEMGERLLVYEYMPHGTLYDHLHGGLSPLNWSLRLKIAMQIAKGLEYLHKELAPPIVHKDLKSSNILLDSEWGARISDFGLLTCGDKDQNGNVQSDVYNFGIVLLEILSGRKAYDGDFVPPSIVEWAVPLIKQGKAAAIIDRSVPLPRIVEPLLKLADIAELAVRHNPGERPVMSEIASWLEQIVKDGLIL 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0788 851 Gene3D - 265 416 IPR009091 -
Acco06g0788 851 Gene3D - 120 264 IPR009091 -
Acco06g0788 851 SUPERFAMILY Protein kinase-like (PK-like) 569 842 IPR011009 -
Acco06g0788 851 FunFam serine/threonine-protein kinase-like protein CCR1 564 672 - -
Acco06g0788 851 SMART serkin_6 595 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0788 851 Pfam Protein kinase domain 595 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0788 851 ProSiteProfiles Protein kinase domain profile. 595 841 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0788 851 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 430 485 IPR001368 GO:0005515
Acco06g0788 851 Gene3D Phosphorylase Kinase; domain 1 556 672 - -
Acco06g0788 851 FunFam Serine/threonine-protein kinase-like protein CCR1 750 848 - -
Acco06g0788 851 Gene3D Transferase(Phosphotransferase) domain 1 673 848 - -
Acco06g0788 851 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 101 845 - -
Acco06g0788 851 FunFam Serine/threonine-protein kinase-like protein CCR1 673 749 - -
Acco06g0788 851 ProSitePatterns Protein kinases ATP-binding region signature. 601 623 IPR017441 GO:0005524
Acco06g0788 851 SUPERFAMILY RCC1/BLIP-II 125 372 IPR009091 -
Acco06g0788 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 716 728 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0788 Acco-ChrAcco06 5196041 5201445 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0788 97 843 Receptor kinase-like Gene Family AT3G59420 31.534 3.61e-113 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Acco06g0788 Pkinase 2.7e-32 CL0016