Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0787 ATGAGATCCCTGAGGAATAGGGGTCGTAAGATTCTGGGGATTTTTATGGTCTTGGTAGTTATACCTCTTATCGTGAAGGTGTTGTTGATTAGTAGTCTAATGGAGGTTAAAGGGACGAGTATAGGGCATGGTCATTTGACCTTGCAGAGGTTCAGAGAGGCTTGCCGTGTTTACTTATGTCCGTTCCTGTGCTATGTTCTTTCTCTTTTATCTTCAATCTCAGAGATCCAAGCAAGATTCAAACTTCAAATCTGTTTTCGAGGCATGAAGATTCTCTGTTCTCTGTCTACTTGTTTCTCACCATCGTTTCAAGACCGAACCACCCATCAAGGAAGAGAGAGTGAAACAACATTTCGAATATTCACGCACAGCGAATTAAAATCTGCGACCAGGAGTTTTGATTCCTCAAACAAGGTCGGAGAAGGCGGTTTTGGCGTTGTGTACAAGGGGCGGCTTCGGGATGGCACATTTGTGGCGGTCAAAGTTCTTTCGATCGAACTGGATTCCTTGCGAGGAGAGAAGGAATTTGTGGCAGAACTGGGCACGCTGGGCGATATCAAGCACCAGAATCTGGTCACTCTCCGAGGTTGTTGCGTGGAAGGAGCTGACAGATACTTAGTCTACGAGTACATGGAAAACAACAACCTTCACCACTACTTTTTAGGTTCACAGGAGGGGAGGATGAGATTTAGCTGGGAATCAAGGAGGGAAGTAGCCATAGGAGTGGCTCGAGGGCTTGCCTATCTTCACGAGGAAATTAAGCCCTATATTGTGCACAGGGACATCAAAGCTAGAAACATACTTCTTGATCGAAATTTGAGGGCCAAAGTTTCAGACTTTGGTCTGGCAAAGTTATTGAGAGACGACAAGTCTTACGTTTCTACTCAAGTCGCGGGGACATTGGGTTATCTTGCTCCGGAATATGCCAGTTCTGGAAAGGTGACAAGAAAATCAGATGTTTACAGCTATGGAATGTTACTCCTACAAATTGTGAGCGGCCTGCCAGTGGTTGATCCTTACCAAGACACGCAACGTTTCCTGGTTGAGAAGGCGTGGGCGGCGTATGAAGCAGGGGATTTAAAAAAAATGGTGGATGCAGAGCTGAAGGAAGAAAGCGTAGCAGAGGAAGAAGGAAGCGTCAGATTCTTGAAGGTGGGATTGCTTTGCGCGCAAGAAACAGCGAAGCTGAGGCCAAGAATGTCAGAAGTGGTTGAAATGTTGAGCAACAAGATTGAAATGTTAAATGTGAGTATTTCAAAACCAGGGCTTGTTGCTGATCTTGGGGCTATCAGAATTAGAGACGCGCCCCATTCTGAGGGTTCCTCTTCCAGTGCTGCAGCCTATGCACCTTCCGTTTGGAGTTCCGCCAATTTTGCCCGTTAA 1383 0.4613 MRSLRNRGRKILGIFMVLVVIPLIVKVLLISSLMEVKGTSIGHGHLTLQRFREACRVYLCPFLCYVLSLLSSISEIQARFKLQICFRGMKILCSLSTCFSPSFQDRTTHQGRESETTFRIFTHSELKSATRSFDSSNKVGEGGFGVVYKGRLRDGTFVAVKVLSIELDSLRGEKEFVAELGTLGDIKHQNLVTLRGCCVEGADRYLVYEYMENNNLHHYFLGSQEGRMRFSWESRREVAIGVARGLAYLHEEIKPYIVHRDIKARNILLDRNLRAKVSDFGLAKLLRDDKSYVSTQVAGTLGYLAPEYASSGKVTRKSDVYSYGMLLLQIVSGLPVVDPYQDTQRFLVEKAWAAYEAGDLKKMVDAELKEESVAEEEGSVRFLKVGLLCAQETAKLRPRMSEVVEMLSNKIEMLNVSISKPGLVADLGAIRIRDAPHSEGSSSSAAAYAPSVWSSANFAR 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0787 460 SUPERFAMILY Protein kinase-like (PK-like) 113 407 IPR011009 -
Acco06g0787 460 ProSiteProfiles Protein kinase domain profile. 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0787 460 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 49 438 - -
Acco06g0787 460 Gene3D Transferase(Phosphotransferase) domain 1 211 419 - -
Acco06g0787 460 FunFam Serine/threonine-protein kinase receptor 103 210 - -
Acco06g0787 460 ProSitePatterns Protein kinases ATP-binding region signature. 139 161 IPR017441 GO:0005524
Acco06g0787 460 CDD STKc_IRAK 139 407 - -
Acco06g0787 460 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g29720 211 411 - -
Acco06g0787 460 SMART serkin_6 133 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0787 460 Gene3D Phosphorylase Kinase; domain 1 96 210 - -
Acco06g0787 460 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Acco06g0787 460 Pfam Protein tyrosine and serine/threonine kinase 136 407 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0787 Acco-ChrAcco06 5186591 5190405 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0787 121 426 Receptor kinase-like Gene Family AT1G56120 50.163 8.92e-90 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco06g0787 PK_Tyr_Ser-Thr 4.5e-47 CL0016