Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0785 ATGGGTAACATAGGAAGTAGTGGCGGTAACGACAACCGTCGCAGGCACAACGCGAGTGGCAGGAGGAGTCATCCGCCTCCCCCTCCGCCGGTGACTCCACAGCCGGAAATCACCGTCAATCGATTTGTCCATCCCGGTGGTCCGCCTTATCCACCACAATTCTCAAATTCGAATCCTCCGCCGTACCAGTACCCGGGTTTCTATCCCCCACCGCCGACGACTATGCCGCTTCCTCTGCCACCTCCTTTTGATCAGCATCATCGTATGGTTTCTCATCCACATGTGGACCCAGTATGGATGGGCGGACGTTACCCTTATGGCCCTATGATGCTTCCTCCCCCGCCCTATGTGGAGCATCAGAATGCGGTTAGGATAAGGAACGATGTTAATATCAAGAAGGAGACTCTGAGGATTGAGCCCGATGAGGAAAATCCGGGGCGGTTCCTCGTGGCATTCACAGTTGACGCCACTGTGGCTGGGAGCATCACCATACTTTTCTTTGCAAAAGATTGTGGTGGATGCATTCTTATTCCGACAAAGGAAAACCTTCTAGCGCCTGTAACTGTGCACTTCGAGCAAGGTCTTGGCCAGAGGTTTAGACAGCCAGCTGGAACTGGCATTGACTTTTCAATATTTGAAGAATCAGAATTATTAAGAAGTGACAAGGATGTCTACCCTCTAGCGGTGAAGGCAGATGCATCCTCTGGTAATCATGAAGGATCCAATGAAACTCTTACACCTGGTGGCACAAACTCTCAGATTACTCAAACAGTCTTTGAGAAAGAGAAAGGAGAGCTCCGGGTGAGGGTAGTTAAGCAGATCTTGTGGATGAATGGAATGAGATATGAGTTGCAGGAGATATACGGTATTGTTAACTCAGTGGAGAATGACTTGGATGGAAATGAGCAAGGAAAAGAGTGTGCCATCTGCTTATCGGAGCCTCGGGATACAACTGTTCTTCCCTGTCGTCACATGTGCATGTGCAGCGGATGTGCGAAGGTTCTGAGGTTCCAGACAAACAAGTGCCCAATTTGCAGACAGCCAGTTGAGAGGCTTTTGGAGATAAAAGTCAACAACGGGCCAGAAGATACAGCAACACAAGTGTGTCAAGATTCCTGTACAGTATAG 1128 0.4938 MGNIGSSGGNDNRRRHNASGRRSHPPPPPPVTPQPEITVNRFVHPGGPPYPPQFSNSNPPPYQYPGFYPPPPTTMPLPLPPPFDQHHRMVSHPHVDPVWMGGRYPYGPMMLPPPPYVEHQNAVRIRNDVNIKKETLRIEPDEENPGRFLVAFTVDATVAGSITILFFAKDCGGCILIPTKENLLAPVTVHFEQGLGQRFRQPAGTGIDFSIFEESELLRSDKDVYPLAVKADASSGNHEGSNETLTPGGTNSQITQTVFEKEKGELRVRVVKQILWMNGMRYELQEIYGIVNSVENDLDGNEQGKECAICLSEPRDTTVLPCRHMCMCSGCAKVLRFQTNKCPICRQPVERLLEIKVNNGPEDTATQVCQDSCTV 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0785 375 ProSiteProfiles Zinc finger RING-type profile. 307 346 IPR001841 -
Acco06g0785 375 Pfam Zinc finger, C3HC4 type (RING finger) 305 351 - -
Acco06g0785 375 MobiDBLite consensus disorder prediction 45 60 - -
Acco06g0785 375 SUPERFAMILY RING/U-box 306 352 - -
Acco06g0785 375 FunFam probable E3 ubiquitin-protein ligase LOG2 291 356 - -
Acco06g0785 375 CDD mRING-HC-C3HC5_MGRN1-like 305 346 IPR045195 -
Acco06g0785 375 SMART ring_2 307 345 IPR001841 -
Acco06g0785 375 PANTHER MAHOGUNIN 1 359 IPR045194 GO:0061630
Acco06g0785 375 MobiDBLite consensus disorder prediction 1 60 - -
Acco06g0785 375 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 290 356 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0785 Acco-ChrAcco06 5173972 5177106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0785 97 326 C3H Transcription Factor Family AT3G09770 62.025 1.52e-98 294