Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0758 ATGGGGAGGAAGGGAAATTGGTTTTCTAGTGTGAAGAAAGCTCTCAGTCCTGAATCAAAGAACAGGGAAGACGAGAGATCAAATAAATCAAAGAAGAAATGGTTTGGAAAGCAAAAATTGCAGGCTTCAGAGTCATACTTGGAAACTGATAATACACCACCTCTTCCTCCACCAGAAGAGGTCAAATTAACTAATATTGAGAGTGAAAACAATCATGCTCCAGATGTGGAAGTTGCGATTGCTGCAGTTACCGAGGAGCCTGCTCCTGCTGTTCAAACAGCCCCTGTTCCAGTTCAAGCTGCTATAATTCCTCAGTCTTCTAGGAAATTAAGTACTGAAGTAGCAGTAATTAAGATTCAAACAGCATTCCGAGGATACTTGGCAAGAAGAGCTTTGAGGGCTTTAAGAGGCCTGGTTAGGTTGAAGTCTCTGATGGAAGGGTCAGTTGTGAAACGCCAAGCTGCTAGTACTCTCCGCTCTATGCAGGCTCTAGCTCGTGTGCAATCTCAGATTCGAGCTAGGAGGATCAGAATGCTAGAGGAGAATCAAGCTATTCAGAGACAGTTCTTACAGAAGCATGCAAAGGAGCTTAGCCTTCAGATGGGAGATGAATGGGATGACAGCCTGCAATCAAAGGACCAAATTGAAGCCAAGTTACTGAGCAAGTATGAGGCCACAGTGAGAAGAGAAAGGGCACTGGCTTATGCATTCTCTCACCAGCAAAATGGGAAGAATTCATCTAGATCTATAAATCCTGTATTTATGGATCCAACCAACCCGGCGTGGGGTTGGAGCTGGCTGGAGCGATGGATGGCAGCCCGACCGTGGGAGAGCAAAGATGTGAATGACCAGTCATCAGTCAAAAGCTCGAGCCGCAACATCACTGGCGGAGAGATCAGTAAATCCTTTGCTCGTTACCAGCTCAATTCTGAAAAGCACTCTCCAACGGCCAGCCAAAACCTAGGCTCCCCCAACTTTCACTCCAACTCAACTCCTTCCAAGGCACTTCCTTCTTCAGCATCAGTTGCCAAAAAACCGAAGAAAGTGAGCCCCAAGGAAACCTCTGTTATTGATGATGATTCTAAAAGCATGGTTAGTGTGCAGTCCAGTTTTCGGAGGCACTCCATTGCTGGATCATTTGTGAGAGATGACGAGAGCCTTGCAAGCTCTCAGGTGGTTCCGAGCTACATGGTGCCAACTCAGTCTGCAAAGGCCAAGTCCAAGACACACAGTCCATTAACAGTAGAGAACGAAACAGTAGAGAAGGGATCCTCTGGGACAGCAAAGAAACGGCTTTCTTTCCCTCCTTCGCCAGCAAGGCCAAGACGGCATTCAGGTCCACCAAAGGTAGAAAGCAGCATCAATTCAGAGGTCACTGTCGGTAATGGTGTGGCTGGTTGA 1401 0.4697 MGRKGNWFSSVKKALSPESKNREDERSNKSKKKWFGKQKLQASESYLETDNTPPLPPPEEVKLTNIESENNHAPDVEVAIAAVTEEPAPAVQTAPVPVQAAIIPQSSRKLSTEVAVIKIQTAFRGYLARRALRALRGLVRLKSLMEGSVVKRQAASTLRSMQALARVQSQIRARRIRMLEENQAIQRQFLQKHAKELSLQMGDEWDDSLQSKDQIEAKLLSKYEATVRRERALAYAFSHQQNGKNSSRSINPVFMDPTNPAWGWSWLERWMAARPWESKDVNDQSSVKSSSRNITGGEISKSFARYQLNSEKHSPTASQNLGSPNFHSNSTPSKALPSSASVAKKPKKVSPKETSVIDDDSKSMVSVQSSFRRHSIAGSFVRDDESLASSQVVPSYMVPTQSAKAKSKTHSPLTVENETVEKGSSGTAKKRLSFPPSPARPRRHSGPPKVESSINSEVTVGNGVAG 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0758 466 PANTHER IQ-DOMAIN 5-RELATED 1 447 - -
Acco06g0758 466 Pfam IQ calmodulin-binding motif 115 133 IPR000048 GO:0005515
Acco06g0758 466 MobiDBLite consensus disorder prediction 310 338 - -
Acco06g0758 466 MobiDBLite consensus disorder prediction 398 422 - -
Acco06g0758 466 MobiDBLite consensus disorder prediction 1 59 - -
Acco06g0758 466 Gene3D - 98 139 - -
Acco06g0758 466 MobiDBLite consensus disorder prediction 310 366 - -
Acco06g0758 466 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Acco06g0758 466 SMART iq_5 111 133 IPR000048 GO:0005515
Acco06g0758 466 MobiDBLite consensus disorder prediction 398 466 - -
Acco06g0758 466 MobiDBLite consensus disorder prediction 16 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0758 Acco-ChrAcco06 5005837 5008314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0758 1 465 IQD Protein Family AT5G03040 52.546 1.61e-137 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1573 02 12038511 12041345 Acco06g0758 06 5005837 5008314 CCT
Acco06g0758 06 5005837 5008314 Acco06g0758 06 5005837 5008314 ECH