Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0752 ATGTTGCCCCCTCCAGCTCACCCTTTAGGTCTGTGTTATAAAATATTTTTGATGTTCCAGCGCATTTTAAAAGTCTCCTCAATAAGTCACAGCGTCCGATCGCTCTCCATTCTCACCGATCCTTACCTCTTTAAACTCGCGCCAAATACAAATTCTCTCTTTCCTTTCAGGGTTCCGGCGACGATGGCTGAAGCTCCGGCCAGTCCAGGCGGTGGCAGCCACGAGAGCGGTGAGCATAGCCCTCGTTCTAATGTCCGCGAGCAGGACAGGTTCCTTCCCATCGCCAATATCAGCCGAATTATGAAAAAAGCACTCCCTGCTAATGGAAAAATAGCCAAGGACTCCAAGGAGACTGTGCAGGAATGTGTTTCAGAGTTCATCAGCTTTATCACCAGCGAGGCGAGTGATAAGTGTCAGAGAGAGAAGAGGAAGACAATTAATGGTGATGATTTGCTTTGGGCGATGGCTACTCTAGGTTTTGAGGATTATATTGATCCCCTGAAGGTTTACCTGGCCAGATACAGAGAGGGTGATACCAAGAGTTCTGCAAAGGGCGGAGATGCGTCGGCCAAGAAAGATGCCCATCCTAGTCCTAATGCTCAGCTTGCCCATCAAGTTTCTTTTCCCCAAGGTGTTAATTACACGAATTCTCAGGCTCAACATATGATGGTTCAGGGTCCAGAGTAG 687 0.4818 MLPPPAHPLGLCYKIFLMFQRILKVSSISHSVRSLSILTDPYLFKLAPNTNSLFPFRVPATMAEAPASPGGGSHESGEHSPRSNVREQDRFLPIANISRIMKKALPANGKIAKDSKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLARYREGDTKSSAKGGDASAKKDAHPSPNAQLAHQVSFPQGVNYTNSQAQHMMVQGPE 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0752 228 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 75 210 IPR027113 GO:0001228|GO:0006355|GO:0016602
Acco06g0752 228 ProSitePatterns NF-YB/HAP3 subunit signature. 122 138 IPR003956 GO:0005634|GO:0006355|GO:0043565
Acco06g0752 228 Gene3D Histone, subunit A 78 222 IPR009072 GO:0046982
Acco06g0752 228 MobiDBLite consensus disorder prediction 179 204 - -
Acco06g0752 228 PRINTS CCAAT-binding transcription factor subunit A signature 119 137 - -
Acco06g0752 228 PRINTS CCAAT-binding transcription factor subunit A signature 138 156 - -
Acco06g0752 228 PRINTS CCAAT-binding transcription factor subunit A signature 157 175 - -
Acco06g0752 228 MobiDBLite consensus disorder prediction 64 85 - -
Acco06g0752 228 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 91 155 IPR003958 -
Acco06g0752 228 SUPERFAMILY Histone-fold 88 188 IPR009072 GO:0046982
Acco06g0752 228 FunFam Nuclear transcription factor Y subunit B-3 80 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0752 Acco-ChrAcco06 4979880 4985393 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0752 62 224 CCAAT-HAP3 Transcription Factor Family AT2G37060 76.879 3.80e-82 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Acco06g0752 CBFD_NFYB_HMF 9.4e-27 CL0012