Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0751 ATGGCATCATTCTCGCGCTCTCATTCGCTTACGTTTGTTTTCATGAGGTGCATTGCAGGTGGATATGGTGGAGGGAGACCAGCCCGCCACATTCGAGTTTTTCTCATTCTCTCCCCTCCCCCTCTCTCTAACTTTTGCGCCTATATGCTCTCTGCTCAGAGCATGATCTCCAACCCTTCGAATTCTCAATCAATGGCGAGCTCGACGCCCACCGACGGGTCTAGCAAGAAGGTGAGAAAGCCATATACTATAACCAAGTCGAGGGAAAGCTGGACCGAGGAAGAGCACGACAAGTTTCTTGAAGCTCTTCAACTATTTGACAGAGATTGGAAGAAAATTGAAGATTTTGTCGGTTCAAAAACGGTTATTCAGATTCGAAGCCATGCCCAGAAATACTTCTTAAAAGTTCAGAAGAATGGAACAATTGCACACGTGCCTCCTCCCCGACCTAAGCGAAAAGCTGCTCATCCATACCCACAAAAAGCACCAAAGAATGTTTTGGTTCCATTGCCAGCATCCATAGCTTACGTTTCTTCAACAAATACTATTGCCCCTGGGTACGCCTTATGGGATGAAACTTCAATACCGATTAATGTTGGATCAAACAGATGCATACCATGTCAGGACGACGTCACCACCCTTCTTGGGGGTGAAGCTGATATTGGATCAAAGGGGATATCAAAAATTAGCAACAGCAGTCTCAGCGGTGTTGGAACCTCTACTAGAATGCTACAAAGTTCTGAGATGCCAAAGCAAGGGAAACAAGGTCCGGTGCTTCATGGTTTACCAGACTTTGCTGAGGTTTACAGCTTTATTGGAAGTGTATTTGATCCAGATTCAAAAGGACATGTACGGAAGCTGAAGGAGATGGATCCTATAAATTTTGAAACTGTTTTGTTGTTGATGAGAAACCTCACTGTCAATTTGTCTAGCCCTGACTTTGAGCCTTTTAAGAAGGTTTTGTCATCATATGTTGGCAATACGAAAGTTACCGCAGGAATTGCTGCCAAAAAGGAAACGGCAAACGATCTATCATTTAGGAGGTCCAATTTGCATGGAACGTTGCCATTTGCTCAGCCTCCAGCAAGGCAGGGAAGTGTCCTGGCCTCGCTGTGGAACGAAACCTGTAAATGTGACAATATGCCTTTGTAA 1152 0.4488 MASFSRSHSLTFVFMRCIAGGYGGGRPARHIRVFLILSPPPLSNFCAYMLSAQSMISNPSNSQSMASSTPTDGSSKKVRKPYTITKSRESWTEEEHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKNGTIAHVPPPRPKRKAAHPYPQKAPKNVLVPLPASIAYVSSTNTIAPGYALWDETSIPINVGSNRCIPCQDDVTTLLGGEADIGSKGISKISNSSLSGVGTSTRMLQSSEMPKQGKQGPVLHGLPDFAEVYSFIGSVFDPDSKGHVRKLKEMDPINFETVLLLMRNLTVNLSSPDFEPFKKVLSSYVGNTKVTAGIAAKKETANDLSFRRSNLHGTLPFAQPPARQGSVLASLWNETCKCDNMPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0751 383 CDD SANT 90 133 IPR001005 -
Acco06g0751 383 ProSiteProfiles SANT domain profile. 86 139 IPR017884 -
Acco06g0751 383 SUPERFAMILY Homeodomain-like 82 138 IPR009057 -
Acco06g0751 383 MobiDBLite consensus disorder prediction 59 81 - -
Acco06g0751 383 NCBIfam myb-like DNA-binding domain, SHAQKYF class 86 135 IPR006447 GO:0003677
Acco06g0751 383 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 83 137 IPR017930 -
Acco06g0751 383 Gene3D - 91 138 - -
Acco06g0751 383 MobiDBLite consensus disorder prediction 59 80 - -
Acco06g0751 383 FunFam protein REVEILLE 6 isoform X1 90 138 - -
Acco06g0751 383 SMART sant 87 135 IPR001005 -
Acco06g0751 383 ProSiteProfiles Myb-like domain profile. 83 133 IPR001005 -
Acco06g0751 383 PANTHER SWI/SNF COMPLEX-RELATED 58 310 - -
Acco06g0751 383 Pfam Myb-like DNA-binding domain 88 133 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0751 Acco-ChrAcco06 4975659 4979766 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco06g0751 Myb_DNA-binding 6.2e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0751 06 4975659 4979766 Acco06g0751 06 4975659 4979766 ECH