Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0748 ATGACAAGGGACGTCCTCATGAGCATTGATGGTGATGATAAAGAATTTCAAGAATTGGCTCAACGTCTACGAGATGGTAAAAAAACCACCAAAGAGGGAGTTGTTGGTGATGAACATAGTTCCCGTGAGGATGATGAGTTAAAAAGTAATGGAACAGCTGAAGAAGTTAAAGTGGGACAAGATGGGATTGTCAAAGCCCCAGCCGTTCAGCTTATGCCCCAACAACAGCCTCAAGGGGCTATTTGGGAGAGATTCCTACATCTCAGATCCCTCAAGGTCTTGCTTGTGGAGATTGACGACTCTACTCGTCATGTTGTCGCAGCACTGCTTTGCAATTGTAGTTATGAAGTTATCGAAGCAGCAAACGGATTGCAAGCATGGAAGATCTTGGAAGATCTAACCAATCAAATAGATCTTGTCTTGACTGAGGTAGCGATGCCTTGCTTATCAGGCATTGGCCTTCTGTCCAAAATTATGGCCCACAAAATGCGGAAAAATATTCCAGTAATTATGATGTCATCTCATGACTCTATGGGTTTAGTCTTTAAGTGTTTGTCAAAGGGTGCCATTGACTTTCTAGTGAAACCTGTACGGAAGAATGAGCTTAAAAACCTGTGGCAGCATGTGTGGAGAAGATGTCATAGTTCAAGTGGCAGTGGAAGTGAAAGTGGCACACAAACTCAGAAATCCATTAAATCAAAGAGTCTTGTGAAGTCTGATAACAACAGTGGCAGCAATGATGAAGAAGACAATGGTAGTGTTGGTCTAAATAATGGGGATGGTAGTGACAATGGTAGTGGTACTCAGAGCTCGTGGACAAAACAAGCTGTAGAAGTTGACAGCCCCAAACCATCAGAGTGGGATCATATAGCTGAGTGCGCTGATAGCACCTGTGCTCAAGTTGTTCTCTCAAATGCCGAAATTAGTGGAAACAAGATGTTTTCTGTAGCCATAAAGGAGTGTCCAGATCAGAAGGATCATCTGGAGCTGAAAGTGGACTCGAGTAGGGATCTTGGCTTGATTCTTGACTGTAGAAATGAGGTTTTAACCAATAATTTGGGGGGGAAACATAGTAACCCTCCTGACATAGGCTCCTCTAAATCCAATGAGCAACTTAATAGAGGACAGCTGAAACTTCACTGTGAAGAGCCTTCTAGCAAGTCAAGATGCAAAGGTCCTTTTCAGTCTGATGCTGTTACTAGCACATATCATTTGCGGAGTCATGGTGGAGAATTTGAAGCCTCCAATAGAAGAGCCAAGCCCTCAGATACTGAAAGCAAAGCTATCAATGGTAATGAAGAGTTGCCGTCTCTTGAGCTTAGTTTAAAGAGACTTAGAGGAGTTAAAGATGCTGGGATTACAATTCAGGATGAACGTAATGTTTTAAGACGTTCAGACCTTTCAGCCTTTTCAAGGTATAATGCGGCTTCTAATGCTAAGAAATTTCCTGGTGGTTGTGTTGGAAGCAATTCTCCCCATAATAATAGCTTAGAAGTTACAAAGAAAGATTCATGTCGTGACATCCATTCCCATTCTAGTGGAAATCCCCCTAATCAGAACTCAAATGGTGCCAGCAATAACATTGACATGGGCTCCACCACTAATAATGCTTTCACTAAATCTGCTGTTATGAGCAAGACAACTGTGGCGTCGCCTGGTAAATGTTTGTACCAATGTTCTGCCTTCCAGCCTATTAAAAATAACTTCATGTGCACCTCTCAACAAGTTGCAGTACATAATACTGAAGATATGACAGCCTCAACTATGCTAGAACCTCCCAGAGGAGGGACACACAAAGATTCTCCAACACAGGACTTCCACAGCATATACAACAACAACCATAGTTGCATTGTTAACAACATGCAGCATGAGGTACCTGCGGACCATGATGATGCATCATCAAAGAAAATTGCTGCCACAGCTCCACACCTTGGGTCATCAAATGTAGTTGAAGGTATTGTTGGAAATTATAGTATCAATAGAAGCGTGTCAGGCAGCAACAATGGAAGCAATGGACAAAATGGGAGCAGCACTGCAGTCAATGCTGGAGGGATAAGCATAGAAAATAACAATGGAATTGCTGGGAATAGTCGAGTTTGTGATGCTAGTGGGAGCGGGAGTGGGAGTGGGAGTGGGAACGGAAGTGGGAGTGCTAACAGAATAGATCAGAAGAAGACTTCTCAAAGAGAAGCTGCCTTAACAAAATTTCGTCAGAAGAGAAAAGAGAGGTGCTTCCGGAAAAAGGTTCGATATCAAAGCAGAAAGAAATTAGCTGAACAACGACCTCGCTTTCGTGGACAATTTGTTCGACAGGCTACAAGTGAGACAGAGGAAGCAACTGACAACTGA 2349 0.4287 MTRDVLMSIDGDDKEFQELAQRLRDGKKTTKEGVVGDEHSSREDDELKSNGTAEEVKVGQDGIVKAPAVQLMPQQQPQGAIWERFLHLRSLKVLLVEIDDSTRHVVAALLCNCSYEVIEAANGLQAWKILEDLTNQIDLVLTEVAMPCLSGIGLLSKIMAHKMRKNIPVIMMSSHDSMGLVFKCLSKGAIDFLVKPVRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSIKSKSLVKSDNNSGSNDEEDNGSVGLNNGDGSDNGSGTQSSWTKQAVEVDSPKPSEWDHIAECADSTCAQVVLSNAEISGNKMFSVAIKECPDQKDHLELKVDSSRDLGLILDCRNEVLTNNLGGKHSNPPDIGSSKSNEQLNRGQLKLHCEEPSSKSRCKGPFQSDAVTSTYHLRSHGGEFEASNRRAKPSDTESKAINGNEELPSLELSLKRLRGVKDAGITIQDERNVLRRSDLSAFSRYNAASNAKKFPGGCVGSNSPHNNSLEVTKKDSCRDIHSHSSGNPPNQNSNGASNNIDMGSTTNNAFTKSAVMSKTTVASPGKCLYQCSAFQPIKNNFMCTSQQVAVHNTEDMTASTMLEPPRGGTHKDSPTQDFHSIYNNNHSCIVNNMQHEVPADHDDASSKKIAATAPHLGSSNVVEGIVGNYSINRSVSGSNNGSNGQNGSSTAVNAGGISIENNNGIAGNSRVCDASGSGSGSGSGNGSGSANRIDQKKTSQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRFRGQFVRQATSETEEATDN 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0748 782 MobiDBLite consensus disorder prediction 723 738 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 701 722 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 739 754 - -
Acco06g0748 782 ProSiteProfiles Response regulatory domain profile. 92 210 IPR001789 GO:0000160
Acco06g0748 782 Pfam Response regulator receiver domain 93 204 IPR001789 GO:0000160
Acco06g0748 782 Gene3D - 90 245 - -
Acco06g0748 782 PANTHER TWO-COMPONENT RESPONSE REGULATOR 91 245 IPR045279 GO:0009736
Acco06g0748 782 MobiDBLite consensus disorder prediction 510 533 - -
Acco06g0748 782 CDD psREC_PRR 93 196 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 351 376 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 482 533 - -
Acco06g0748 782 FunFam Two-component response regulator-like PRR37 91 249 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 215 285 - -
Acco06g0748 782 SMART REC_2 91 206 IPR001789 GO:0000160
Acco06g0748 782 SUPERFAMILY CheY-like 89 215 IPR011006 -
Acco06g0748 782 MobiDBLite consensus disorder prediction 215 278 - -
Acco06g0748 782 Pfam CCT motif 729 771 IPR010402 GO:0005515
Acco06g0748 782 MobiDBLite consensus disorder prediction 701 782 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 351 375 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 407 429 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 410 424 - -
Acco06g0748 782 MobiDBLite consensus disorder prediction 22 52 - -
Acco06g0748 782 ProSiteProfiles CCT domain profile. 729 771 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0748 Acco-ChrAcco06 4941237 4948736 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0748 167 778 Response Regulator Gene Family AT5G02810 49.137 2.35e-121 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Acco06g0748 Response_reg 3.7e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0748 06 4941237 4948736 Acco06g0748 06 4941237 4948736 ECH