Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0746 ATGGGTTGGATTCCATGTTCTGGAAATCCAAACGGTAAGAAGAAAGGAAAGAATAAGATGAGGACGGAAGTGCAGGAGAATACGGTAGATCAAACCAAAACAACTCCAGGGAAGTTGAAGAGGAACTCATCCACTAGTTCCAGAGATCCCTCTAAAAATGGGAATTCTGATCACATTGCAGCCCAGACTTTCACATTCCGTGAGTTGGCGATTGCAACAAAAAATTTTAGGACAGAAAGTCTTTTGGGAGAGGGAGGATTTGGTAGGGTTTATAAGGGACGTTTGGAAAGTTCTAATCAGGTTGTCGCAATAAAGCAACTTGACCGAGATGGGCTCCAAGGGAATAGAGAATTCCTTGTTGAAGTGTTGATGTTAAGTCTACTTCACCACCCTAACCTTGTCAACCTTATTGGTTATTGCGCCGATGGGGATCAAAGGCTTCTAGTTTATGAATACATGCCATTAGGATCCTTGGAGGATCACTTATATGATATTTCTCCTGCCAAAAAACGACTTGACTGGAACACACGAATGAAAATTGCTGCTGGGGCAGCAAAGGGATTGGAATATCTGCATGACAAAGCGAACCCTCCTGTCATATATCGAGATCTAAAGTGTTCAAACATTTTGCTTGGGGAAGGGTATCAACCAAAGTTATCTGATTTTGGTTTGGCTAAACTTGGACCTGTTGGCGAAAACACCCATGTATCCACAAGGGTTATGGGCACCTATGGATACTGTGCTCCAGAGTATGCAATGACAGGTCAACTGACTCTGAAATCAGATGTTTATAGCTTTGGCATAGTTCTTCTGGAAATAATTACTGGAAGAAAAGCCATCGACAGTTCAAAAGCTGCGGGAGAACAGAATCTTGTTGCATGGGCTAGACCCTTGTTTAAAGATCGAAGAAAATTCTCACAAATGGCTGATCCAATGCTTCAAGGTCAGTACCCTCCCAGAGGCCTATATCAAGCCCTTGCTGTTGCAGCAATGTGTGTTCAGGAGCAAGCAAATATGCGGCCAGTTATAGCTGATGTCGTCACTGCCTTGTCTTACCTTGCTTCCCAAAGGTATGACAGCAATTCACAATCTCTTCAAAGCCCGCGCCTTGCCCCTGCAACTCCTACAACCAGAAGAGGAAGATGA 1146 0.4372 MGWIPCSGNPNGKKKGKNKMRTEVQENTVDQTKTTPGKLKRNSSTSSRDPSKNGNSDHIAAQTFTFRELAIATKNFRTESLLGEGGFGRVYKGRLESSNQVVAIKQLDRDGLQGNREFLVEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEYMPLGSLEDHLYDISPAKKRLDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDLKCSNILLGEGYQPKLSDFGLAKLGPVGENTHVSTRVMGTYGYCAPEYAMTGQLTLKSDVYSFGIVLLEIITGRKAIDSSKAAGEQNLVAWARPLFKDRRKFSQMADPMLQGQYPPRGLYQALAVAAMCVQEQANMRPVIADVVTALSYLASQRYDSNSQSLQSPRLAPATPTTRRGR 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0746 381 Gene3D Transferase(Phosphotransferase) domain 1 153 371 - -
Acco06g0746 381 MobiDBLite consensus disorder prediction 1 58 - -
Acco06g0746 381 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Acco06g0746 381 SUPERFAMILY Protein kinase-like (PK-like) 57 350 IPR011009 -
Acco06g0746 381 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0746 381 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0746 381 CDD STKc_IRAK 82 350 - -
Acco06g0746 381 FunFam Serine/threonine-protein kinase PBS1 48 152 - -
Acco06g0746 381 ProSitePatterns Protein kinases ATP-binding region signature. 82 105 IPR017441 GO:0005524
Acco06g0746 381 Gene3D Phosphorylase Kinase; domain 1 47 152 - -
Acco06g0746 381 FunFam Serine/threonine-protein kinase PBS1 153 368 - -
Acco06g0746 381 PANTHER OS07G0668900 PROTEIN 26 362 - -
Acco06g0746 381 MobiDBLite consensus disorder prediction 27 58 - -
Acco06g0746 381 Pfam Protein tyrosine and serine/threonine kinase 79 349 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0746 Acco-ChrAcco06 4933712 4936373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0746 30 355 Glycoside Hydrolase AT3G07070 66.258 6.03e-164 464
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Acco06g0746 PK_Tyr_Ser-Thr 4.9e-46 CL0016