Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0739 ATGATAAGAGCAATCCCTCAGAGACTGCGAATAATATCCAATCATGGACATCCTTTTACTGGAATTTCCCCTGTCAGGGCCAGTTGTAATAATGATGGCATTGGTGATGGGGATCTTTACTATCGTCTTTTATTTTTTGTTGACCTGAAAGAAGCACATGATCCCATAATGATGGAAGAAAGAACCACCATCTTAGCGGCAATCTCCACCCTCCCTCCTTCCCAACTCTCTCCTCTCTCTCTCTCCCTCCTCTCCGCCACCGACGACCACCGCCTCCGCCTTTCCTCCGTCCTCTCTTCCCCGTTTCTCTTCTTCTCCACCCTCCGCCACCTCCAGTCTCTCTCCCTCTCCGAAAAGTACCTCCTTATCGCTCGCCACCTCCTCTCCTCCCTCCGCCGCATCACCACCCACTTCCTCCTCTCCGACCTCACACTGCCCAGGTCCGCCGCCGCCATTAGTGAGAGTGACCTGAATGCCGTTCTCCTCCTCCTCTTTTTCTGCGAAACCCACCAACACAACCCCACAGTCCTCGAGGAGAATTATTCAGATTGGCGGACCAGCTTATGTAATATTTTCTCCGATAAGCTGTTGACAGCTGCTTATTCTCCCGTTGGGGCGAGTCCTTGGACGGCCCTGGCTCCTTACGTTGATATGGTGAGTCGGAGCTGGAGACTTGTGAGGGCAAGTTGCGGCGGCGGGAACAAGGGGGCGTCGAAGGGGACGGTAGTGGAGCTCCCGGCTGTGGAAGTGAAGGAGGGCGGAAGGGAGTGTGTGATATGTAAGGAGGAGATGAAGGTGGGGAAGGAGGTGTGTGAATTCCCATGTGAGCATTTGTTTCATTGGAGCTGTATATTGCCGTGGCTCAGCAACAGTGACACGTGTCCTTGCTGTCGGCACCGGTTGCCGTCCGATGATGTCTTCGGAGAGATCCAAAGGTTTTGGGATATGTTGATTAAATCGAGTGATCGGCAAAGCCTGGTCTGGTCATAA 990 0.5313 MIRAIPQRLRIISNHGHPFTGISPVRASCNNDGIGDGDLYYRLLFFVDLKEAHDPIMMEERTTILAAISTLPPSQLSPLSLSLLSATDDHRLRLSSVLSSPFLFFSTLRHLQSLSLSEKYLLIARHLLSSLRRITTHFLLSDLTLPRSAAAISESDLNAVLLLLFFCETHQHNPTVLEENYSDWRTSLCNIFSDKLLTAAYSPVGASPWTALAPYVDMVSRSWRLVRASCGGGNKGASKGTVVELPAVEVKEGGRECVICKEEMKVGKEVCEFPCEHLFHWSCILPWLSNSDTCPCCRHRLPSDDVFGEIQRFWDMLIKSSDRQSLVWS 329
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0739 329 SUPERFAMILY RING/U-box 253 304 - -
Acco06g0739 329 Pfam Ring finger domain 256 298 IPR001841 -
Acco06g0739 329 CDD RING-H2_PA-TM-RING 256 298 - -
Acco06g0739 329 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 182 302 - -
Acco06g0739 329 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 228 304 IPR013083 -
Acco06g0739 329 ProSiteProfiles Zinc finger RING-type profile. 257 298 IPR001841 -
Acco06g0739 329 SMART ring_2 257 297 IPR001841 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco06g0739 Acco-ChrAcco06 4886584 4888965 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0739 59 322 C3H Transcription Factor Family AT5G02750 43.007 3.78e-63 200