Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0719 ATGCCTTTGCTATTTAATCCTCTGCTCTGTATTTCTAACTTCTCTTCCATCACATTACTTCCTCTTCATTATTTTGAACGGCAGCCTGATCCTGTGGAAGCAGATCCATTAAAGGGTAGCAGGAACCAAAGGAAGGTTGACATTCTTGGGATGATTGTAGGCATAATTGGTTCTAAAGACCGGCTTGTTAATGAATATCGAACTATGCTTGCAGAAAAGCTTTTAAACAAATCTGATTATGATATTGACTCAAAGATAAGAATTCTAGAGCTCCTTAAGGGCGTTGGTAGGCAAGAGTTCATTATGAGAATTTGCGTTTTAGGGTTTCAACTTTCAAGTGTTGGGAGGAGCATAACTGCGGAGAAAATGGCTGCGAGAATAAAGGTTTTCGAGCTGAGGAATAAATCGAAGACAGAGCTACTCAACCAGTTGAAGGAACTCAAGGCAGAGCTCGCTTTACTCCGAGTCGCCAAGGTCACCGGCGGTGCCCCTAACAAGCTCTCTAAGATCAAGGTTGTGAGGCTGTCAATAGCGCAGGTGTTGACTGTTATTTCCCAGAAGCAGAAAGCAGCTTTGAGAGAGGCTTACAAAAACAAGAAGTATCTACCTCTTGATCTCCGTCCCAAGAAGACCCGAGCCATTCGTAGGCGTCTCACCAAACACCAGGCTTCATTGAAGACAGAGCGCGAAAAGAAGAAGGAAATGTACTTTCCCTTGAGGAAGTATGCCATCAAAGTGTAG 741 0.4359 MPLLFNPLLCISNFSSITLLPLHYFERQPDPVEADPLKGSRNQRKVDILGMIVGIIGSKDRLVNEYRTMLAEKLLNKSDYDIDSKIRILELLKGVGRQEFIMRICVLGFQLSSVGRSITAEKMAARIKVFELRNKSKTELLNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTVISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPLRKYAIKV 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0719 246 CDD Ribosomal_L29_HIP 131 187 - -
Acco06g0719 246 Gene3D - 124 200 IPR036049 GO:0003735|GO:0005840|GO:0006412
Acco06g0719 246 Hamap 50S ribosomal protein L29 [rpmC]. 127 187 IPR001854 GO:0003735|GO:0005840|GO:0006412
Acco06g0719 246 Coils Coil 137 157 - -
Acco06g0719 246 SUPERFAMILY Ribosomal protein L29 (L29p) 127 188 IPR036049 GO:0003735|GO:0005840|GO:0006412
Acco06g0719 246 PANTHER 60S RIBOSOMAL PROTEIN L35 125 246 IPR045059 GO:0000463|GO:0022625
Acco06g0719 246 FunFam 60S ribosomal protein L35 201 246 - -
Acco06g0719 246 SUPERFAMILY Cullin homology domain 18 102 IPR036317 -
Acco06g0719 246 NCBIfam 50S ribosomal protein L29 131 187 IPR001854 GO:0003735|GO:0005840|GO:0006412
Acco06g0719 246 Pfam Ribosomal L29 protein 131 187 IPR001854 GO:0003735|GO:0005840|GO:0006412
Acco06g0719 246 FunFam 60S ribosomal protein L35 123 200 - -
Acco06g0719 246 Gene3D - 201 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0719 Acco-ChrAcco06 4773768 4779044 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0719 125 246 Cytoplasmic Ribosomal Protein Gene Family AT3G09500 91.803 5.49e-72 214