Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0685 ATGTTGCCACATTTTGGATTGCAGGTTGCTGCTGTTAATTATGTTGTTGGGTCCCATGTTTGGGTAGAAGACTCTGATGTATCTTGGATTGATGGTGAGGTTTTGGCGGTTAATGGAGAAGAAATCAAAGTCCTTTGCACTTCAGGGAAGACGGTGGTTGTTAAAGCTTCCGACATTCATCCTAAAGATACTGAGGTGCCACCATGTGGAGTGGATGATATGACAAAGCTCGCTTACCTGCATGAACCTGGAGTCTTGGACAACCTGAGAATGAGATATGATATCAATGAAATTTATACTTACACTGGAAATATATTGATTGCTGTGAACCCTTTCACAAAGCTTCCTCATCTATATGATAGCCATATGATGGCACAATATAAAGGGGCAGCTTTTGGTGAGCTGAGTCCTCATCCATTTGCTGTTGCAGATGCTGCATATAGGCTTATGGTTAATGAGGGAATCAGCCAATCAATATTGGTCAGTGGTGAAAGTGGGGCTGGTAAAACGGAGAGTACCAAATTACTAATGCGTTATCTTGCTTACATGGGAGGACGAGCAGCTGCTGATGGTAGGAGCGTTGAGCAGAAAGTCCTGGAGTCTAATCCAGTTTTAGAAGCCTTTGGCAATGCAAAGACTGTTAGGAACAATAATTCAAGTCGCTTTGGTAAATTCGTGGAGATTCAATTTGATCAGATGGGGAGAATTTCAGGAGCTGCGATAAGAACTTACCTTCTGGAAAGATCACGTGTTTGCCAGGTGTCAGATCCAGAGAGAAATTATCACTGTTTCTACATGCTCTGTGCTGCACCTCCTGAGGATGTTAAGAAGTACAAGGTGGGAAAGCCCGCAACATTTCATTATCTAAATCAATCAAATTGCTTTCAAATAGAAGGGCTTGATGAGGCTAAAGAATATATTGCCACAAGGAGAGCAATGGATGTTGTTGGAATAAGTTCCGAGGAACAGGATGCAATATTTCGTGTGGTGGCTGCAATTTTGCATCTTGGAAACGTTGAATTTGCCAAAGGGAAGGAAATAGACTCATCTGTGCCCAAGGATGAAAAATCTAGGTTCCATCTGCAAACTGCTGCTGAGCTTTTCATGTGTGATGCAAAGGCACTTGAAGATTCTCTTTGCAAGCGTGTAATTGTTACACGTGACGAGACAATCATAAAGTGCTTGGATCCAGATGCTGCTGCACTCAGCCGAGATGCTTTGGCTAAAATTGTGTACTCTAGGCTGTTTGATTGGCTGGTGGAAAAAATTAATAGTTCGATTGGCCAAGATCCTGATTCAAAGTCCCTAATTGGCGTGCTGGATATTTATGGTTTTGAGAGTTTCAAAAATAACAGTTTTGAGCAATTTTGTATTAATTTGACAAATGAAAAGCTTCAGCAACATTTTAATCAGCATGTTTTTAAAATGGAGCAAGAAGAATACAAGAAGGAGGAGATCGATTGGAGTTACATTGAATTTATTGACAATCAAGATATTCTAGATCTCATTGAAAAGAAACCTGGAGGTATTATTGCTCTTCTTGATGAAGCTTGTATGTTTCCTAGATCAACATATGAAACTTTTGCTCAAAAACTGTATCAGACATTCAAAAACCATAAAAGGTTCAGCAAGCCGAAATTATCACGCAGTGACTTCACAATATTGCATTATGCTGGTGATGTTACTTATCAAACTGAATTGTTCCTGGACAAGAACAAAGATTATGTTGTCGCAGAACATCAGGCACTTCTTAATGCTTCTAAATGCCCTTTTGTGTCGGGTTTGTTTCCCCCTGCCCCTGAAGAATCTTCCAAACAGTCAAAGTTCTCTTCAATAGGTTCTCGATTTAAGCAACAATTGCAATCACTGCTTGAAACACTCAGTGATTCTGAGCCGCACTACATTCGGTGTGTAAAACCCAATAATTTGCTTAAGCCGGCAATTTTTGAGAACAAAAATGTTTTGCAGCAACTGCGTTGTGGGGGAGTTATGGAAGCAATAAGGATTAGCTGTGCAGGATATCCCACTAGAAAAACCTTTGATGAATTTGCAGACAGATTTGGCCTTCTTGCACCTGATGCTGTGGATGGAAGTCCTGATGAGATCACTGTTTGCAAGAGGATTCTAGAGAAGGTTGGACTTCAAGGCTATCAGATTGGGAAAACAAAGGTGTTTCTTCGAGCTGGGCAAATGGCAGAGCTTGATACCCGTAGGAGTGAGATATTGGGAAAGTCAGCAAGCATTATTCAGAGGAAAGTTCGTTCCTTTTTGGCATGCCGAAGTTTTGCCTTGCTTCGCATGTCTGCTATACAGATTCAAGCTGCATGCAGAGGACAACTTGCTCGTCATGTTTATGAGGGAATGCGGCAAGAGGCGTCTAGTGTGAAAATTCAGAAGAATTTCCGCATGCATATTGCTAGAAAGGCATATAAAGAATTGTATGCCTCTGCTATTTCCATTCAGTCTGGTATGCGGGGGATGGTTGCTCGTTCTGAACTACGCTTTAGGAGGGAGACCAGAGCAGCAATTGTTATACAGAGCCATTGCCGGAAATACTTGTCACAGCATCATTTTATGGACTTAAAGAGAGCAGCAATCAGAACACAGTGTGCATGGAGAGGAAGAGTTGCTCGGTGTGAATTGCGAAAGCTCAAGATGGCTGCCAGGGAAACTGGAGCTTTACAAGCTGCCAAAAATAAGCTTGAAAAGCAAGTTGAAGATCTTACATTGAGGTTGCAATTGGAGAAGCGATTGAGGGTTGACATAGAAGAAGCAAAAACACATGAAAATGAACGATTACAATCTGCTTTGCAAGAGATGCAACTTCAGTTTAAAGAGACTAAAGTGCTGCTTGAAAAGGAGCGTGAAGCTTCAAAAGGGGCTGCAGAGAGAGCTCCTGTGATACAGGAGGTTCCAGTTGTTGATAATGCATTGCTGGAGAGGCTCGCTAGTGAGAATGAGAAACTAAAGACCTTGGTGAGTTCGCTTGAAAAGAAAATTGATGAAACAGAGAAAAGGTTTGAAGAGGCAAACAAAATTAGTGAAGAACGAACAAAGCAAGCCTTGGAGGCAGAATCAAAGATAATTCAGCTGAAGACTGCTATGCAAAGGCTTGAAGAAAAATTTTTCGACGTTGAATCTGAAAATCAGGTTCTTCGGCAACAATCTTTGCTAAGCTCGAATGTAAAGAAAATGTCAGAGCACCTCTCAACAACCCCTTCAGACGAGAGGTTGGAAAATGGTCATCATGTGATGGAAGAGCAAAAAGCTGTTGAAGCACAGACTCTTACAACACCAGTTAAAAAGTTTGGCACAGAATCTGACAGCAAATTAAGGAGATCATACATTGAACGCCAGCATGAGAATGTTGAAGCGCTAATCAACTGTGTTAAAAAAAATATTGGGTTTACTCATGGGAAACCTGTTGCTGCTTTTACCATTTACAAATGCCTTCTCCACTGGAAATCATTTGAAGCTGAGAGGACAAGTGTATTTGATCGCCTCATCCAGATGATTGGTTCTGCAATTGAGAATCAAGATGATAATGACCTTATGGCTTATTGGCTGACAAATACGTCCACATTATTGTTTTTGCTCCAAGAAAGTTTGAAATCTGGTGGTACAAGCGATGCAACTCCAGCTAAAAAACCACCAAATCCAACATCCCTTTTTGGAAGAATGGCTATGGGTTTTCGTTCATCCCCTTCATCTGCCAACCTTGCTGCCCCTGCATTGCACATCATCCGCAAGGTGGAGGCTAAATACCCTGCTTTGCTTTTTAAGCAGCAGCTCACGGCATATGTGGAGAAAATATATGGTATCATTCGAGACAACTTGAAGAAGGAGTTAACACCATTGCTTTCATTATGCATCCAGGCACCGAGAACATCGAAGGGAGTGTTACGGGCTGGACGATCATTTGGTAAAGACTCTCCTATGGGTCACTGGCAGAGTATTATTGAATCCCTCAACACCCTCCTCTGTACACTGAAGGAGAATTTTGTACCTCCTGTTCTCATCCAAAAGGTCTTTAGTCAAACATTCTCATATATTAATGTACAACTCTTCAATAGTTTTCTACTACGCCGTGACTGTTGCACATTCAGCAATGGGGAATATGTAAAAGCTGGATTAGCAGAATTGGAACTATGGTGCTGCCAAGCAAAGGAGGAGTATGCTGGGTCATCTTGGGATGAGCTTAAGCACATAAGACAGGCAGTCGGATTCTTGGTCATTCATCAGAAGTACAGGATTTCCTATGATGAAATTACCAATGATTTGTGTCCTATCCTGAGTGTCCAGCAGCTGTATAGAATATGTACACTTTACTGGGATGCCAATTATAACACTCGAAGTGTATCCTCAGATGTCCTTGCAGGCATGAAGGTGCTTATGGCTGAGGACTCCAACAATGCTCAAACTGATTCTTTCTTGCTGGATGATAATTCCAGTATCCCTTTCTCCGTGGATGACCTCTCCTCTTCACTGCAAACCAAGGAATTCTCAGACATGAAAGCAGCGGATGAACTTCTTGAGAATCAAGCCTTCCAGTTTTTAATTGAGTAG 4566 0.4163 MLPHFGLQVAAVNYVVGSHVWVEDSDVSWIDGEVLAVNGEEIKVLCTSGKTVVVKASDIHPKDTEVPPCGVDDMTKLAYLHEPGVLDNLRMRYDINEIYTYTGNILIAVNPFTKLPHLYDSHMMAQYKGAAFGELSPHPFAVADAAYRLMVNEGISQSILVSGESGAGKTESTKLLMRYLAYMGGRAAADGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDQMGRISGAAIRTYLLERSRVCQVSDPERNYHCFYMLCAAPPEDVKKYKVGKPATFHYLNQSNCFQIEGLDEAKEYIATRRAMDVVGISSEEQDAIFRVVAAILHLGNVEFAKGKEIDSSVPKDEKSRFHLQTAAELFMCDAKALEDSLCKRVIVTRDETIIKCLDPDAAALSRDALAKIVYSRLFDWLVEKINSSIGQDPDSKSLIGVLDIYGFESFKNNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIDWSYIEFIDNQDILDLIEKKPGGIIALLDEACMFPRSTYETFAQKLYQTFKNHKRFSKPKLSRSDFTILHYAGDVTYQTELFLDKNKDYVVAEHQALLNASKCPFVSGLFPPAPEESSKQSKFSSIGSRFKQQLQSLLETLSDSEPHYIRCVKPNNLLKPAIFENKNVLQQLRCGGVMEAIRISCAGYPTRKTFDEFADRFGLLAPDAVDGSPDEITVCKRILEKVGLQGYQIGKTKVFLRAGQMAELDTRRSEILGKSASIIQRKVRSFLACRSFALLRMSAIQIQAACRGQLARHVYEGMRQEASSVKIQKNFRMHIARKAYKELYASAISIQSGMRGMVARSELRFRRETRAAIVIQSHCRKYLSQHHFMDLKRAAIRTQCAWRGRVARCELRKLKMAARETGALQAAKNKLEKQVEDLTLRLQLEKRLRVDIEEAKTHENERLQSALQEMQLQFKETKVLLEKEREASKGAAERAPVIQEVPVVDNALLERLASENEKLKTLVSSLEKKIDETEKRFEEANKISEERTKQALEAESKIIQLKTAMQRLEEKFFDVESENQVLRQQSLLSSNVKKMSEHLSTTPSDERLENGHHVMEEQKAVEAQTLTTPVKKFGTESDSKLRRSYIERQHENVEALINCVKKNIGFTHGKPVAAFTIYKCLLHWKSFEAERTSVFDRLIQMIGSAIENQDDNDLMAYWLTNTSTLLFLLQESLKSGGTSDATPAKKPPNPTSLFGRMAMGFRSSPSSANLAAPALHIIRKVEAKYPALLFKQQLTAYVEKIYGIIRDNLKKELTPLLSLCIQAPRTSKGVLRAGRSFGKDSPMGHWQSIIESLNTLLCTLKENFVPPVLIQKVFSQTFSYINVQLFNSFLLRRDCCTFSNGEYVKAGLAELELWCCQAKEEYAGSSWDELKHIRQAVGFLVIHQKYRISYDEITNDLCPILSVQQLYRICTLYWDANYNTRSVSSDVLAGMKVLMAEDSNNAQTDSFLLDDNSSIPFSVDDLSSSLQTKEFSDMKAADELLENQAFQFLIE 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0685 1521 Pfam Myosin head (motor domain) 71 727 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 PRINTS Myosin heavy chain signature 203 230 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 PRINTS Myosin heavy chain signature 489 517 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 PRINTS Myosin heavy chain signature 436 464 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 PRINTS Myosin heavy chain signature 99 118 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 PRINTS Myosin heavy chain signature 156 181 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 ProSiteProfiles IQ motif profile. 838 864 IPR000048 GO:0005515
Acco06g0685 1521 Gene3D Myosin VI head, motor domain, U50 subdomain 319 608 - -
Acco06g0685 1521 ProSiteProfiles IQ motif profile. 790 819 IPR000048 GO:0005515
Acco06g0685 1521 ProSiteProfiles IQ motif profile. 765 794 IPR000048 GO:0005515
Acco06g0685 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 794 890 IPR027417 -
Acco06g0685 1521 CDD MYSc_Myo11 83 727 IPR036018 -
Acco06g0685 1521 Gene3D - 674 740 - -
Acco06g0685 1521 SMART DIL_2 1342 1449 IPR002710 -
Acco06g0685 1521 FunFam Class V myosin 446 587 - -
Acco06g0685 1521 Coils Coil 979 1055 - -
Acco06g0685 1521 Gene3D Kinesin motor domain 72 669 IPR036961 -
Acco06g0685 1521 ProSiteProfiles IQ motif profile. 861 890 IPR000048 GO:0005515
Acco06g0685 1521 Coils Coil 884 957 - -
Acco06g0685 1521 Gene3D - 446 630 - -
Acco06g0685 1521 PANTHER MYOSIN 61 1455 - -
Acco06g0685 1521 FunFam unconventional myosin-Va 841 888 - -
Acco06g0685 1521 ProSiteProfiles Myosin motor domain profile. 69 739 IPR001609 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 ProSiteProfiles Dilute domain profile. 1166 1467 IPR002710 -
Acco06g0685 1521 Gene3D - 841 889 - -
Acco06g0685 1521 Gene3D - 792 840 - -
Acco06g0685 1521 Gene3D - 742 791 - -
Acco06g0685 1521 Pfam Myosin N-terminal SH3-like domain 17 59 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 42 792 IPR027417 -
Acco06g0685 1521 ProSiteProfiles IQ motif profile. 813 842 IPR000048 GO:0005515
Acco06g0685 1521 FunFam unconventional myosin-Va 792 840 - -
Acco06g0685 1521 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 15 64 IPR004009 GO:0003774|GO:0005524|GO:0016459
Acco06g0685 1521 Gene3D - 259 317 - -
Acco06g0685 1521 Pfam DIL domain 1343 1446 IPR002710 -
Acco06g0685 1521 Pfam IQ calmodulin-binding motif 815 834 IPR000048 GO:0005515
Acco06g0685 1521 Pfam IQ calmodulin-binding motif 839 858 IPR000048 GO:0005515
Acco06g0685 1521 Pfam IQ calmodulin-binding motif 793 811 IPR000048 GO:0005515
Acco06g0685 1521 Pfam IQ calmodulin-binding motif 863 882 IPR000048 GO:0005515
Acco06g0685 1521 Pfam IQ calmodulin-binding motif 766 785 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 764 786 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 789 811 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 741 763 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 860 882 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 812 834 IPR000048 GO:0005515
Acco06g0685 1521 SMART iq_5 837 859 IPR000048 GO:0005515
Acco06g0685 1521 FunFam Myosin heavy chain 259 314 - -
Acco06g0685 1521 FunFam Myosin 2 319 431 - -
Acco06g0685 1521 CDD MyosinXI_CBD 1117 1490 IPR037975 GO:0007015
Acco06g0685 1521 SMART MYSc_2a 64 740 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0685 Acco-ChrAcco06 4465144 4478640 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0685 9 1519 Myosins gene family AT5G43900 75.000 0.0 2349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0071 06 501349 511456 Acco06g0685 06 4465144 4478640 CCT
Acco06g0685 06 4465144 4478640 Acco06g0685 06 4465144 4478640 ECH