Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0680 ATGCCAACTTCGATCGCCTTCTTCCTTGTTCTTCTTAACCTGCTTATCTCTTGCTCAGGTTATTTCTCTTTGACAATATTCATGTCTCCTTCTCCGAAACCATACCAGGCATTGTCTGTCAAGGAAATGTTATTTAAGCAGGGCATGATGGCAGATTTCATCATGTATTCTGCATCATTTGATTTGTTCTTGAAGTCAGTTTCCACTAGTGTATCATCTGCTTCACATAAACCTCCTAAAACTTGGTTGGTTAGGCCTTCTCTGGCACCTGCACCATCTCCATCTGACCAAGATCCAAATGTGAATCCTAGTCCAAAACCTCACCACCACCACCATCACCGTGGCGTGAGACCTCATGTAGTAGCTCCATCCCCTTCTAAAGATCAAGGTTGTGACCAAATATGTACTGATCCACTGACAGCGACCCCCTTTGGTTCACCTTGTGGCTGCGTCTTTCCCATGAAAGTTAAACTTATTTTGGATGTTGCACCTTATGCAATTTTTCCATTAATGAATCAGTTAGAGATTGAGGTTGCATCAGGCACATATCTGGAACAGAGCCAGGTGAAGATAATGGGTGCAAGTGCTGACAGTCAAAATCAGGGAAAAACTGTAATTGATATGAACTTGGTTCCATTGGGAGAGAAATTTGACAACACCACTGCGGTTCTGATATATGAGAGGTTTTGGCATGAGAAAATTCCTCTGGATAGGAGCCTTTTTGGTGATTATGCAGTCCTGTCCATTAGTTATCCAGGGATTCCGTCATCACTGCCATCTGGAAGCAACGTTGGAAGTGGTCCTAGTGGGAGCGCCAATGGTCTTCCAGTCACTGCAAATTTTGTCAGCAAGAATCAGAAAATGAATCTTAGAACCATAGTCATCATTGCTTTATCTGCCTTTGTACTCATGTTGGTTTTGATTGGAGCGTTTTCCATCGTGTTGAAATGGAGGAGGTTTAGGAGGCCATCAAGTGCTGTTGGTCCTGCATTTACTTCATCCATAAACAAGCGATCTGGCATGGGGTCTATGTTGTCAAGTAGTATTACAAGCTCAACATCAGTGTCCCTTATGTCCACCATGGCTACTTCTATCCTCTCTGTTAGAACATTTTCACTTTCTGAGCTTGAGAAAGCAACAGATAAGTTCAGTTCAAAGAGAGTATTAGGAGAAGGTGGATTTGGGCGTGTTTATAGTGGGACATTGGAAGATGGAACTGAAGCAGCAGTTAAGCTGCTAACAAAGGATAATCAGAATGGAGACCGTGAGTTTATTGCAGAAGTTGAGATGCTAAGCCGCTTGCATCACCGGAATCTTGTGAAACTCATTGGTATCTGCATTGAAGGGCGTAGACGGTGCTTGGTGTATGAGCTAGTTCACAATGGCAGTGTTGAGTCCCATTTGCATGGTGTTGACAAGAAGGGTCCTCTTGATTGGGAAGCACGGATGAAAATTGCTCTTGGAGCAGCGAGAGGGTTGGCCTATCTCCATGAAGACTCTAATCCTCGCGTAATTCATCGAGACTTCAAAGCTAGTAATGTGTTATTAGAAGATGATTTCACCCCTAAGGTATCTGATTTTGGCTTAGCAAGAGAAGCAACTGAAGGAAGTCATCATATTTCTACACGTGTCATGGGAACTTTTGGGTATGTTGCCCCGGAATATGCAATGACAGGCCATTTACTTGTTAAGAGTGATGTTTATAGCTATGGGGTAGTGCTGCTTGAACTTCTTACCGGCAGAAAACCAGTGGAAATGTCTCAACCTCCTGGACAGGAGAATCTAGTGACATGGGCAAGGCCACTCTTGACGAGTAGAGAAGGCTTAGAACAGCTAGTGGATCCATCTTTAGCTGGAAGTTATGACTTTGACGACATGGCAAAGGTGGCCGCCATCGCCTCCATGTGTGTCCACCCTGAGGTCACTCAGAGACCTTTTATGGGTGAAGTTGTGCAGGCTTTGAAATTGATATACAACGACACAGACGAGACTTGTGGGGATTACTGTAGTCAGAAGGAGTCTTCTGCTCAAGAATCTGACATTAGAGCTGATCTTGTTCCTTCAGATAGCAGTTGGTGGAATGCCGGAGGATTGACCCCAAGGTTAACTTATGGTCAAGCATCTTCATTCATCACAATGGAATACAGTTCTGGTCCACTTGAAGAAATGGAAAACAGACCGTTTTCAACTTCAAGCTTACTAGGAGACGAGATATCCTCACCAATTATGCATGGGAACAGATCAGGGCCGTTAAGATCAGTCCGAAGCAAGCTATCTTTGCATAGGTTTACCGGAAGTCGGAGTGAACATGGGGGACTTCATTCCAAGCGTGGTTTTAACGATGGTTTCTGGGTTTAA 2358 0.4402 MPTSIAFFLVLLNLLISCSGYFSLTIFMSPSPKPYQALSVKEMLFKQGMMADFIMYSASFDLFLKSVSTSVSSASHKPPKTWLVRPSLAPAPSPSDQDPNVNPSPKPHHHHHHRGVRPHVVAPSPSKDQGCDQICTDPLTATPFGSPCGCVFPMKVKLILDVAPYAIFPLMNQLEIEVASGTYLEQSQVKIMGASADSQNQGKTVIDMNLVPLGEKFDNTTAVLIYERFWHEKIPLDRSLFGDYAVLSISYPGIPSSLPSGSNVGSGPSGSANGLPVTANFVSKNQKMNLRTIVIIALSAFVLMLVLIGAFSIVLKWRRFRRPSSAVGPAFTSSINKRSGMGSMLSSSITSSTSVSLMSTMATSILSVRTFSLSELEKATDKFSSKRVLGEGGFGRVYSGTLEDGTEAAVKLLTKDNQNGDREFIAEVEMLSRLHHRNLVKLIGICIEGRRRCLVYELVHNGSVESHLHGVDKKGPLDWEARMKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSHHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVEMSQPPGQENLVTWARPLLTSREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDTDETCGDYCSQKESSAQESDIRADLVPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLEEMENRPFSTSSLLGDEISSPIMHGNRSGPLRSVRSKLSLHRFTGSRSEHGGLHSKRGFNDGFWV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0680 785 FunFam receptor-like serine/threonine-protein kinase ALE2 356 458 - -
Acco06g0680 785 CDD STKc_IRAK 389 657 - -
Acco06g0680 785 SUPERFAMILY Protein kinase-like (PK-like) 367 656 IPR011009 -
Acco06g0680 785 PANTHER OS01G0750732 PROTEIN 124 680 - -
Acco06g0680 785 Pfam Protein tyrosine and serine/threonine kinase 385 653 IPR001245 GO:0004672|GO:0006468
Acco06g0680 785 MobiDBLite consensus disorder prediction 73 127 - -
Acco06g0680 785 Gene3D Transferase(Phosphotransferase) domain 1 459 680 - -
Acco06g0680 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 504 516 IPR008271 GO:0004672|GO:0006468
Acco06g0680 785 Gene3D Phosphorylase Kinase; domain 1 354 458 - -
Acco06g0680 785 FunFam Receptor-like serine/threonine-protein kinase ALE2 459 676 - -
Acco06g0680 785 ProSitePatterns Protein kinases ATP-binding region signature. 389 411 IPR017441 GO:0005524
Acco06g0680 785 ProSiteProfiles Protein kinase domain profile. 383 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0680 Acco-ChrAcco06 4414875 4420809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0680 134 771 Receptor kinase-like Gene Family AT5G56890 53.916 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Acco06g0680 PK_Tyr_Ser-Thr 3.9e-47 CL0016