Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0674 ATGGCTCTCTGGATGGAAAAGGATTCTGAGCCCTTGACCGAAAGCGAGAAAGCAGACCTTGATGCCATTGCTGCACTCAAAGAGTCCGCTGCTATTGAACTTAAGGAAAAGGGCAATCAATATGTCAAAATGGGCAAAAAACATTATTCTGATGCTATTGACTGTTACACAAGGGCAATAGATCAGAAAGTCTTAAGCGACTCAGAGAACTCAGTTCTTTTTGCAAATAGAGCGCATGTGAATTTGATGCTGGGAAATTATAGACGTGCTCTAACAGATTCTGAGGAGGCAATTAAGTTGTGCCCCTCAAATATAAAGGCAATTTATAGAGCTGCCAAAGCATCTCTTTCATTAAATTTGTTGACTGAAGCTCAATCCCATTGTCGAAATGGCCTTCAGTTGGACCCAAATAATGAAGAATTGAAGAAGCTTGGCCAACAGATTGATCTAAAGAAAGTAGAACAGGACAATCGTGAAGCTGAAATCTCCAAAGCTGTTGCAGAGGCAAAGGAACTTGTGTCAGCAATAGAAAATAGAGGCTTGAAGATTGGGAAGGCAATGTTTCGAGAACTTACTGGACTTAAAAGACCAGTATTAGACAAAAATAATATTGTTCATTGGCCTGTTCTTCTCCTGTATGCAGAGGTTATGTCCAGTGACTTCATTGAAGATTTCTGCGAGACTGACATGTTTTCAGTTCATCTTGATATGATATCCTTTTCTATAAATTGCTTTTATCAGCCTTTGCCTTGGGATGATAAAAGCAATTACAAACGTGAATTCATTGAATTATACTATGAGGCTGGTTCTGGAGTTGGTCTCCCAAGGGCAAAACTTCTCCATTCTTTATTAGAGGGAACTGCAGCTTCTCAACAAGAAAGTGCCGGTGATGAAGAGAAAGATGCAGTTGACGGTTCTAACCATGTTGACACAGGCGCTCCTAAATGGATCAAAGTAAATGAAAGGTCGACGCTCCATGATGTTCTGAAGGACCCCAATTTCATCATTCCTGGCATCCCAGTATTCTATGTTGTTTCAAAGCGATCTAGCTTTTATGGCAAGTTCAAAGCTGGAAAATGGACTCCTCCAAGCATATGA 1098 0.4044 MALWMEKDSEPLTESEKADLDAIAALKESAAIELKEKGNQYVKMGKKHYSDAIDCYTRAIDQKVLSDSENSVLFANRAHVNLMLGNYRRALTDSEEAIKLCPSNIKAIYRAAKASLSLNLLTEAQSHCRNGLQLDPNNEELKKLGQQIDLKKVEQDNREAEISKAVAEAKELVSAIENRGLKIGKAMFRELTGLKRPVLDKNNIVHWPVLLLYAEVMSSDFIEDFCETDMFSVHLDMISFSINCFYQPLPWDDKSNYKREFIELYYEAGSGVGLPRAKLLHSLLEGTAASQQESAGDEEKDAVDGSNHVDTGAPKWIKVNERSTLHDVLKDPNFIIPGIPVFYVVSKRSSFYGKFKAGKWTPPSI 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0674 365 CDD CTWD_Cns1-like 170 357 - -
Acco06g0674 365 Pfam Cns1/TTC4 Wheel domain 202 269 IPR044059 GO:0051879
Acco06g0674 365 SMART tpr_5 31 66 IPR019734 GO:0005515
Acco06g0674 365 SMART tpr_5 105 138 IPR019734 GO:0005515
Acco06g0674 365 SMART tpr_5 71 104 IPR019734 GO:0005515
Acco06g0674 365 ProSiteProfiles TPR repeat profile. 71 104 IPR019734 GO:0005515
Acco06g0674 365 MobiDBLite consensus disorder prediction 290 309 - -
Acco06g0674 365 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 4 11 362 - -
Acco06g0674 365 Coils Coil 150 170 - -
Acco06g0674 365 SUPERFAMILY TPR-like 22 143 IPR011990 GO:0005515
Acco06g0674 365 Gene3D Tetratricopeptide repeat domain 29 151 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0674 30 162 Calmodulin-binding Proteins AT3G25230 31.944 1.48e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0674 06 4386274 4389570 Acco06g0674 06 4386274 4389570 ECH