Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0664 ATGTGGGTCATCCCCGCAATCACTACTACCCCTTCTTTCCCACGGCACTTATCCATCACCTTCCCCTTCCCCTTCCCCTTCCCCAACAACACACCTAACCTCTCCATTTATCTTCTCTTTCCTAACGCACTAACTGCTTCCTCTTCTACTCTGGGCTTCGCGATGCAGGGTGATTCTTCTCCGGATTCGATGCTCACGGACTCTAAGGAGGATAATTTGGTCCTTTCTTCTGAGGACTCGTCTTGCCCTCAGGAGTCCGAGCTTGAATTGGGTCTTGGCTTGAGCCTCTCTCATCCTCGACTCAAGTCTCAGCCACCTCCCACGACTCAGTTTGCTCGAATTTTGACGGCTATGGATTTTTCTTCATCTGCCTCCTCCTCCTCCTCTCCTAACGTGGCAGCTGGTACCAAGAGAGCTGCTGATTCTCTTGTCGCTACAAACGGTCCCAGTCAAGTTGTTGGGTGGCCTCCTCTTCGAGCATATAGAATGAACAGCTTTAATAATAATCACTCAAAATCTCCAGCCACCGAAGTGAAGAGTAATCAAACAGCTGCAAGGAAGATTACTGACAATGGCAGTAATAAAAACAATAGTACTGCCGAAGAAAAAGCACACATCAGGAGATCCTTATTTGTGAAGGTAAATATGGATGGGACACCAATTGGAAGGAAGGTCGATTTGAGTGCTCATAGTTCCTATGAAACCTTGGCACACACTTTGGAGGATATGTTTAATGAACGGACCCCAGTTGTCACCAAAGGATTAAATGGGGAGGATCGTGGTATTGTCATGGGAGCAAAAAAGAGACACTTAAACTTGCTGGATGAATCTTCCAATTTTGTGATAACTTACGAAGACAAAGAAGGAGACTGGATGCTTGTTGGGGATGTTCCTTGGGACATGTTTATTGATTCTGTGAGGAGGCTTAGAATTATGAGGACGTCTGAGGCAAATGGACTTGCGCCAAGATTGGAGGAAAAGAAGAGCAGACTGAGAAGTGAGCGCATGTAG 1011 0.4649 MWVIPAITTTPSFPRHLSITFPFPFPFPNNTPNLSIYLLFPNALTASSSTLGFAMQGDSSPDSMLTDSKEDNLVLSSEDSSCPQESELELGLGLSLSHPRLKSQPPPTTQFARILTAMDFSSSASSSSSPNVAAGTKRAADSLVATNGPSQVVGWPPLRAYRMNSFNNNHSKSPATEVKSNQTAARKITDNGSNKNNSTAEEKAHIRRSLFVKVNMDGTPIGRKVDLSAHSSYETLAHTLEDMFNERTPVVTKGLNGEDRGIVMGAKKRHLNLLDESSNFVITYEDKEGDWMLVGDVPWDMFIDSVRRLRIMRTSEANGLAPRLEEKKSRLRSERM 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0664 336 SUPERFAMILY CAD & PB1 domains 205 312 - -
Acco06g0664 336 FunFam Auxin-responsive protein 204 324 - -
Acco06g0664 336 Pfam AUX/IAA family 119 323 IPR033389 -
Acco06g0664 336 ProSiteProfiles PB1 domain profile. 209 316 IPR000270 GO:0005515
Acco06g0664 336 MobiDBLite consensus disorder prediction 56 82 - -
Acco06g0664 336 MobiDBLite consensus disorder prediction 167 203 - -
Acco06g0664 336 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 87 319 IPR003311 GO:0005634|GO:0006355
Acco06g0664 336 Gene3D - 204 326 - -
Acco06g0664 336 MobiDBLite consensus disorder prediction 167 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0664 Acco-ChrAcco06 4299729 4302621 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0664 213 323 B3 DNA Binding Superfamily AT1G59750 32.432 9.89e-13 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco06g0664 AUX_IAA 1.8e-62 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1692 02 12997685 13001422 Acco06g0664 06 4299729 4302621 CCT
Acco06g0664 06 4299729 4302621 Acco06g0664 06 4299729 4302621 ECH