Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0656 ATGACAAGCTTTCACAATGCTTCTGCTCTGTTCTTTCACGTACTCTTGCTATCTTTTCTTCCATCCAAGATAGCTGCATCACTGAGAACAGAAGCAGAAGCTCTAGTGAAATGGAAAAACAGTTTGTCTCCTCCTCTTCCTTCTACTCTCAACTCATGGTCCCTCACCAATACGAACAACCTCTGCAATTGGGGTGCCATAATCTGTGACAGTTCTAATACAACAGTCTCAGAGATAAACCTCTCTGGAGCCAAACTTACTGGCACGCTTACGGGTTTGGATTTCACTTCTCTCCCCAATCTCACCCGCCTGGACCTCAGTAACAACGGTTTCAACGGGACTCTTCCTGCTGAGCTGGACCAGCTGAAAGAGCTTCAATATATCAATTTATACAACAACAACCTCAATGGGACCATTCCCTATCAGGTCACGAACCTCCCAAAGGTATGGCACCTAGACTTTGGATCAAACTACTTTGTTAATCCTCCTGACTGGTCAAAATATTCAGGCATCCCTTCCTTAACCCACCTCAGCTTGGCTCTCAACACATTCACTTATGAGCTTCCAAGCTTCATTCTAGAGTGTCAAAATTTGACATATCTAGACATGTCCTACAATACGATCAGTCTAATACCAGAGTCAATGTATACCCGTCTGCAAAAGCTTGAATATCTCAATATGAGCAATTGTAAGCTAGAAGCACACTTGTCATCCAACTTGTCTAAGCTTTCCAATCTCAAAGAAATTCATCTGGGTAAAAACAAGTTGATAGGTTCCATTTTCACAGATATAGGATCAATATCTGGACTACAAATTCTTGAATTGAATGACAATTTGTTCCCGGGGGAAATCCCTTCCTCTCTAGGCCAGCTTAGTGACTTGTGGCGTCTTGATCTCAGCCACAATTCCTTAAATTCTACCATTCCTTCTGAGCTTGGCCTTTGTACCAATCTAACCTACCTGGCTCTAGCAGCGAATTCTCTGGTTGGTTCCTTGCCAATTTCGTTATCCAATCTGACAAAGATTAGAGATTTGAGTTTATCAAATAATCTCTTTACAGGTCAAATCCCTGCTTCGTTGATCTCTAAATGGACCGAGTTAAATTCTTTGCAACTTCAAAACAATAATTTCACGGGAGAAATTCCTTCATCAATTGGCCTATTGACAAAAATAGATTTTCTTTTTTTATACAACAATACATTCTCTGGCCCTATTCCTCCTGAGATTGGGAACATGCAAGCAATGACAAATTTAGACCTTTCTTCAAACAAATTGTCTGGTCCCATTCCTTCAACCATATGGAGACTTGAAAACATTACAATCATTACTCTTGCCTTCAATAACCTCTCTGGAACCATCCCCATGGAAATTGGAAACCTTACTTCATTGATAACTTTTGATGTCAACAGTAATTTTCTCCATGGTGTGTTGCCCAAGACTATTTCCCAATTAAAAATGTTGCAGAATTTTTCTATATTCACCAACAAGTTTTCAGGGAGCATTCCAAGAGATTTTGGGAAGTATAGCCCTGATTTGAAAGTAGTCTTTCTTTCACATAACAACTTCTCCGGAGAACTACCTCCTGATTTGTGCAGCAGTTTTGCACTCGAGGACTTGAGGGTGAATAACAACAGTTTTTCCGGACCACTGCCCAAGTGCTTGAGAAATAGTTCGGCATTAACACTGGTGAAGCTTGAAAGAAATCAATTCACAGAAAACATCACTGAAGCATTTGAGATTTACCCAAATCTTAAATCCATCACACTCAGTGGCAATCAGTTTGTTGGCGAACTCTCCCCAAAATGGAGTGAATGCAAGAACTTAACGAGGATAGAAATGGATAACAACAAACTTTCTGGGAAAATTCCATATGAATTGAGCTTGTTAGGCCAATTACAACATCTAAGCCTGCACTCCAATCAATTTACGGGCAGCATTCCACCGGAAATGGGAAATCTAAGGCAACTTTACTTGTTCAACTTGAGTGGTAATCATTTGACAGGACAAATCCCCCAGAGTCTTGGCAGATTGGGCCACCTCAATTATCTTGATTTATCGAAGAACAACTTAAATGGAAGCATACCAAAGGAGCTCAGTAACTGTGGCAGTTTGATTAGCTTTAATTTGAGCCATAACAATTTAACTGGGGAGATACCATCTGAACTTGGCAATCTGTTTTCGCTTCAATACTTTCTGGACCTCAGTAGCAACTTTCTTTCAGGGCCAATTCCTCAGAACCTGGAGAAGCTCATTCATTTGGAGATCCTCAATGTCTCACGGAACCATCTTTCAGGGACAATCCCACAATCATTCTCAAGTATGCTTAGTCTTCAATCCATCGATTTTTCTTACAACAGCTTGACGGGTACTATCCCAACTGGAGGTATTTTCCAAACAGCACCTATTGAAGCTTATGTAGGAAATTATGATTTGTGTGGCAAGGCAAAAGGATTAATTGCTTGTTCCGTAAAATCATCCCAAGACAGATCTGGAGGGGTCAACAAAAAGGTACTTCTTGGTGTTATCATACCAATTGGAGCGCTACTAATTTTCGGGGTGATCGTTGTTACTGTTAGAATCCGAGTTTTTCACCAACGGACCACACTTCCTGACGAAGAGTCCACCGATGCTCTAAAGAATGAAAAAATTGTAAGCACGATTTGGGGAAGAAAGGCAAAATTCACATTCGCTGAAATTGTTAAAGCCACAGATGACTTCGATGACAAATACTGCATTGGAAAAGGAGGTTTTGGAAGTGTTTACAGAGCAGAATTAACTACAGGCATAGTTGTCGCCGTCAAAAGACTCAAGATCACGAATTCCAGTGACATTCCAGTTGAGAATCTTCAGAGTGTTGAGAATGAGATAAAAACTCTTACCGAAGCAAAACACCGCAATATCATAAAGCTTTATGGTTTTTATTACAGCCAGGAAAGCGCATACTTGGTTTACGAATATGCAGAAAGAGGCAGCTTGGGAAAAGTGTTGTATGATGAGGAAACGAAGACGATATTAAGCTGGCCTCAAAGGGTGAAAATTGTGCAGGGTATAACACAAGCAATGGTTTACCTACACAATGATTGCATCCCACCAGTTGTGCATCGAGATGTGACGTTGAATAACATATTGTTGGATTCAGAATATGAACCCCGCCTTGCAGATTTCGGCATAGCAAAGCTTCTTAGGTCCAATTCAACAAGCTGGACCTCAATTGCTGGCTCCTACGGCTACATGGCTCCAGAGCTAGCACAAACAATGCGGGTAACAGAGAAGTGTGACGTTTATAGTTTTGGAGTGGTGGCATTAGAGATAATACTGGGAAAGCACCCTGGCGATTTCTTGGCCACTTTGCCATTAGTAGAGAATCCACAAGTGTTGGTGAAGGATGTGATAGACCAAAGACTCCTACCTCCTCCAGCTCGATTAGGTGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACGCGAACATACCCTGAGTCTAGACCGACCATGCGTTTTGTGGCCCAGCAATTATCGGCTCTTGAGCAAACATCTCTTGTTGAACCCTTTAGCACAATAACCCTATATAAGCTAACAAGGTTTCATAGGTAG 3600 0.4133 MTSFHNASALFFHVLLLSFLPSKIAASLRTEAEALVKWKNSLSPPLPSTLNSWSLTNTNNLCNWGAIICDSSNTTVSEINLSGAKLTGTLTGLDFTSLPNLTRLDLSNNGFNGTLPAELDQLKELQYINLYNNNLNGTIPYQVTNLPKVWHLDFGSNYFVNPPDWSKYSGIPSLTHLSLALNTFTYELPSFILECQNLTYLDMSYNTISLIPESMYTRLQKLEYLNMSNCKLEAHLSSNLSKLSNLKEIHLGKNKLIGSIFTDIGSISGLQILELNDNLFPGEIPSSLGQLSDLWRLDLSHNSLNSTIPSELGLCTNLTYLALAANSLVGSLPISLSNLTKIRDLSLSNNLFTGQIPASLISKWTELNSLQLQNNNFTGEIPSSIGLLTKIDFLFLYNNTFSGPIPPEIGNMQAMTNLDLSSNKLSGPIPSTIWRLENITIITLAFNNLSGTIPMEIGNLTSLITFDVNSNFLHGVLPKTISQLKMLQNFSIFTNKFSGSIPRDFGKYSPDLKVVFLSHNNFSGELPPDLCSSFALEDLRVNNNSFSGPLPKCLRNSSALTLVKLERNQFTENITEAFEIYPNLKSITLSGNQFVGELSPKWSECKNLTRIEMDNNKLSGKIPYELSLLGQLQHLSLHSNQFTGSIPPEMGNLRQLYLFNLSGNHLTGQIPQSLGRLGHLNYLDLSKNNLNGSIPKELSNCGSLISFNLSHNNLTGEIPSELGNLFSLQYFLDLSSNFLSGPIPQNLEKLIHLEILNVSRNHLSGTIPQSFSSMLSLQSIDFSYNSLTGTIPTGGIFQTAPIEAYVGNYDLCGKAKGLIACSVKSSQDRSGGVNKKVLLGVIIPIGALLIFGVIVVTVRIRVFHQRTTLPDEESTDALKNEKIVSTIWGRKAKFTFAEIVKATDDFDDKYCIGKGGFGSVYRAELTTGIVVAVKRLKITNSSDIPVENLQSVENEIKTLTEAKHRNIIKLYGFYYSQESAYLVYEYAERGSLGKVLYDEETKTILSWPQRVKIVQGITQAMVYLHNDCIPPVVHRDVTLNNILLDSEYEPRLADFGIAKLLRSNSTSWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIILGKHPGDFLATLPLVENPQVLVKDVIDQRLLPPPARLGEAIAFIMTIALACTRTYPESRPTMRFVAQQLSALEQTSLVEPFSTITLYKLTRFHR 1199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0656 1199 SUPERFAMILY L domain-like 29 302 - -
Acco06g0656 1199 Gene3D Transferase(Phosphotransferase) domain 1 988 1187 - -
Acco06g0656 1199 Gene3D Ribonuclease Inhibitor 166 259 IPR032675 -
Acco06g0656 1199 ProSiteProfiles Protein kinase domain profile. 906 1187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0656 1199 Pfam Leucine Rich Repeat 752 773 IPR001611 GO:0005515
Acco06g0656 1199 Pfam Leucine rich repeat 582 642 IPR001611 GO:0005515
Acco06g0656 1199 Pfam Leucine rich repeat 172 232 IPR001611 GO:0005515
Acco06g0656 1199 Pfam Leucine rich repeat 654 714 IPR001611 GO:0005515
Acco06g0656 1199 Gene3D Ribonuclease Inhibitor 480 822 IPR032675 -
Acco06g0656 1199 FunFam MDIS1-interacting receptor like kinase 2 987 1180 - -
Acco06g0656 1199 Gene3D Ribonuclease Inhibitor 361 479 IPR032675 -
Acco06g0656 1199 Gene3D Ribonuclease Inhibitor 29 165 IPR032675 -
Acco06g0656 1199 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 509 825 - -
Acco06g0656 1199 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Acco06g0656 1199 SUPERFAMILY RNI-like 470 792 - -
Acco06g0656 1199 ProSitePatterns Tyrosine protein kinases specific active-site signature. 1032 1044 IPR008266 GO:0004672|GO:0006468
Acco06g0656 1199 Gene3D Phosphorylase Kinase; domain 1 870 986 - -
Acco06g0656 1199 ProSitePatterns Protein kinases ATP-binding region signature. 912 934 IPR017441 GO:0005524
Acco06g0656 1199 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 408 505 - -
Acco06g0656 1199 SUPERFAMILY Protein kinase-like (PK-like) 885 1174 IPR011009 -
Acco06g0656 1199 Pfam Protein kinase domain 909 1110 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0656 1199 FunFam Nuclear pore complex protein NUP107 28 162 - -
Acco06g0656 1199 SMART LRR_typ_2 460 483 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 171 195 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 677 701 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 412 436 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 750 773 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 629 653 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 774 799 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 98 122 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 196 218 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 291 315 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 219 243 IPR003591 -
Acco06g0656 1199 SMART LRR_typ_2 339 363 IPR003591 -
Acco06g0656 1199 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 167 394 - -
Acco06g0656 1199 SUPERFAMILY RNI-like 261 571 - -
Acco06g0656 1199 PANTHER LEUCINE RICH REPEAT KINASE 2 470 1178 - -
Acco06g0656 1199 Gene3D Ribonuclease Inhibitor 260 360 IPR032675 -
Acco06g0656 1199 FunFam Leucine-rich repeat receptor protein kinase MSP1 870 986 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0656 Acco-ChrAcco06 4236192 4239873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0656 339 792 Receptor kinase-like Gene Family AT4G08850 31.172 2.99e-60 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g0656 Pkinase 5e-45 CL0016