Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0655 ATGCAATCATCATTCAGTCAGAAGCCATACACACCATGGCGAAGCATGACAAGCTTTCACAATGCTTCTGCTATGTTCTTTCACGTACTCTTGCTATGTTTTCTTCCATCCAAGATAGCTGCATCACTGAGAACAGAAGCAGAAGCTCTCGTGAAATGGAAAAACAGTTTGTCTCCTCCTCTTCCTTCTACTCTCAACTCATGGTCCCTCACCAATACGAACACACTCTGCAATTGGGGTGCCATAATCTGTGACAGTTCTAATACAACAGTCTCAGAGATAAACCTCTCTGGAGCCACTGGCACACTTACGGGTTTGGATTTCACTTCTCTCCCCAATCTCACCCGCCTGGACCTCAGTAACAACGGTTTCAATGGGACTCTTCCTGCTGAGCTGGACCAGCTGAAAGAGCTTCAATATATCAATTTATACAACAACAACCTCAATGGGACCATTCCCTATCAGGTCACGAACCTCCCAAAGGTATGGCACCTAGACTTTGGATCAAACTACTTTGTTAATCCTCCTGACTGGTCAAAATATTCAGGCATCCCTTCCTTAACCCACCTCAGCTTGGCTCTCAACAGTTTCACTTATGAATTTCCAAGCTTCATTCTAGAGTGTCAAAATTTGACATATCTAGACATGTCCTACAATACGATCAGTCTAATACCAGAGTCAATGTATACCCGTCTGCAAAAGCTTGAATATCTCAATATGAGCAATTGTAAGCTAGAAGCACACTTGTCATCCAACTTGTCTAAGCTTTCCAATCTCAAAGAAATTCATCTGGGTAATAACAAGTTGATAGGTTCCATTTTCACGGATATAGGATCAATATCTGGACTACAAATTCTTGAATTGAATGACAATTTGTTCCAGGGGGAAATCCCTTCCTCTCTAGGCCAGCTTAGTGACTTGTGGCGTCTTGATCTCAGCCACAATTCCTTAAATTCTACCATTCCTTCTGAGCTTGGCCTTTGTATCAATCTAACCTACCTGGCTCTAGCAGCGAATTCTCTGGTTGGTTCCTTGCCAATTTCGTTATCAAATCTGACAAAGATTAGAGATTTGGGTTTATCAAATAATCTCTTTACAGGTCAAATCCCTGTTTCGTTGATCTCTAAATGGACCGAGTTAAATTCTTTGCAACTTCAAAACAATAATTTCACGGGAGAAATTCCTTCATCAATTGGCCTATTGACAAAAATAGATTTTCTTTTTTTATACAACAATACATTCTCTGGCCCTATTCCTCCTGAGATTGGGAACATGCAAGCAATGACAAATTTAGACCTTTCTTCAAACAAATTGTCTGGTCCCATTTCTTCAACCATATGGAGACTTGAAAACATTACAATCATTACCCTTGCCTTCAATAACCTCTCAGGAACCATCCCCATGGAAATTGGAAACCTTACTTCATTGATAACTTTTGATGTCAACAGTAATTTTCTCCATGGTGTGTTGCCCAAGACTATTTCCCAATTAAAAATGTTGCAGAATTTTTCTATATTCACCAACAAGTTTTCAGGGAGCATTCCAAGAGATTTTGGGAAGTATAGCCCTGATTTGAAAGTAGTCTTTCTTTCACATAACAACTTCTCCGGAGAACTACCTCCTGATTTGTGCAGCAGTTTTGCACTCGAGGACTTGAGGGTGAATAACAACAGTTTTTCCGGACCACTGCCCAAGTGCTTGAGAAATAGTTCGGCATTAACACTGGTGAAGCTTGAAAGAAATCAATTCACAGAAAACATCACTGAAGCATTTGAGATTTACCCAAATCTTAAATTCATCACACTCAGTGGCAATCAGTTTGTTGGCGAACTCTCCCCAAAATGGAGTGAATGCAAGAACTTAACGAGGATAGAAATGGATAACAACAAACTTTCTGGGAAAATTCCATCTGAATTGAGCTTGTTAAGCCAATTGCAACATCTAAGCCTGCACTCCAATCAATTTACGGGCAGCATTCCACCGGAAATGGGAAATCTAAGGCAACTTTACTTGTTCAACTTGAGTGGTAATCATTTGACAGGACAAATCCCCCAGAGTCTTGGCAGATTGGGCCACCTCAATTATCTTGATTTATCGAAGAACAACTTAAATGGAAGCATACCAAAGGAGCTCAGTAACTGTGGCAGTTTGATTAGCTTTAATTTGAGCCATAACAATTTAACTGGGGAGATACCATCTGAACTTGGCAATCTGTTTTCGCTTCAATACTTTCTGGACCTCAGTAGCAACTTTCTTTCAGGGCCAATTCCTCAGAACCTGGAGAAGCTCATTCATTTGGAGATCCTCAATGTCTCACGGAACCATCTTTCAGGGACAATCCCACAATCATTCTCAAGAAATTATGATTTGTGTGGCAAGGCAAAAGGATTAATTGCTTGTTCCGTAAAATCATCCCAAGACAGATCTGGAGGGGTCAACAAAAAGGTACTTCTTGGTGTTATCATACCAATTGGAGCGCTACTAATTTTCGGGGTGATCGTTGTTACTGTTAGAATCCGAGTTTTTCACCAACGGACCACACTTCCTGACGAAGAGTCCACCGATGCTCTAAAGAATGAAAAAATTGGGATAACACAAGCAATGGTTTACCTACACAATGATTGCATCCCACCAGTTGTGCATCGAGATGTGACGTTGAATAACATATTGTTGGATTCAGAATATGAACCCCGCCTTGCAGATTTCGGCATAGCAAAGCTTCTTAGGTCCAATTCAACAAGCTGGACCTCAATTGCTGGCTCCTACGGCTACATGGCTCCAGAGCTAGCACAAACAATGCGGGTAACAGAGAAGTGTGACGTTTATAGTTTTGGAGTGGTGGCATTAGAGATAATACTGGGAAAGCACCCTGGCGATTTCTTGGCCACTTTGCCATTAGTAGAGAATCCACAAGTGTTGGTGAAGGATGTGATAGACCAAAGACTCCCACCTCCCCCAGCTCGATTGGGTGAAGCGATAGCCTTTATAATGACCATAGCCTTGGCATGCACACGAACGTACCCCGAGTCTAGACCAACCATGCACTTTGTGGCCCAGCAGTTATCGACTCTTGAGCAGACATCTCTTGTTGAACCCTTTAGCACAATAACCCTAAATAAGCTAACGAGGTTTCATAGGTAG 3141 0.4164 MQSSFSQKPYTPWRSMTSFHNASAMFFHVLLLCFLPSKIAASLRTEAEALVKWKNSLSPPLPSTLNSWSLTNTNTLCNWGAIICDSSNTTVSEINLSGATGTLTGLDFTSLPNLTRLDLSNNGFNGTLPAELDQLKELQYINLYNNNLNGTIPYQVTNLPKVWHLDFGSNYFVNPPDWSKYSGIPSLTHLSLALNSFTYEFPSFILECQNLTYLDMSYNTISLIPESMYTRLQKLEYLNMSNCKLEAHLSSNLSKLSNLKEIHLGNNKLIGSIFTDIGSISGLQILELNDNLFQGEIPSSLGQLSDLWRLDLSHNSLNSTIPSELGLCINLTYLALAANSLVGSLPISLSNLTKIRDLGLSNNLFTGQIPVSLISKWTELNSLQLQNNNFTGEIPSSIGLLTKIDFLFLYNNTFSGPIPPEIGNMQAMTNLDLSSNKLSGPISSTIWRLENITIITLAFNNLSGTIPMEIGNLTSLITFDVNSNFLHGVLPKTISQLKMLQNFSIFTNKFSGSIPRDFGKYSPDLKVVFLSHNNFSGELPPDLCSSFALEDLRVNNNSFSGPLPKCLRNSSALTLVKLERNQFTENITEAFEIYPNLKFITLSGNQFVGELSPKWSECKNLTRIEMDNNKLSGKIPSELSLLSQLQHLSLHSNQFTGSIPPEMGNLRQLYLFNLSGNHLTGQIPQSLGRLGHLNYLDLSKNNLNGSIPKELSNCGSLISFNLSHNNLTGEIPSELGNLFSLQYFLDLSSNFLSGPIPQNLEKLIHLEILNVSRNHLSGTIPQSFSRNYDLCGKAKGLIACSVKSSQDRSGGVNKKVLLGVIIPIGALLIFGVIVVTVRIRVFHQRTTLPDEESTDALKNEKIGITQAMVYLHNDCIPPVVHRDVTLNNILLDSEYEPRLADFGIAKLLRSNSTSWTSIAGSYGYMAPELAQTMRVTEKCDVYSFGVVALEIILGKHPGDFLATLPLVENPQVLVKDVIDQRLPPPPARLGEAIAFIMTIALACTRTYPESRPTMHFVAQQLSTLEQTSLVEPFSTITLNKLTRFHR 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 180 266 IPR032675 -
Acco06g0655 1046 Gene3D Transferase(Phosphotransferase) domain 1 846 1035 - -
Acco06g0655 1046 SUPERFAMILY RNI-like 274 607 - -
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 267 374 IPR032675 -
Acco06g0655 1046 Pfam Leucine Rich Repeat 765 785 IPR001611 GO:0005515
Acco06g0655 1046 FunFam MDIS1-interacting receptor like kinase 2 182 374 - -
Acco06g0655 1046 Pfam Protein tyrosine and serine/threonine kinase 861 1021 IPR001245 GO:0004672|GO:0006468
Acco06g0655 1046 PANTHER LEUCINE RICH REPEAT KINASE 2 471 844 - -
Acco06g0655 1046 Pfam Leucine rich repeat N-terminal domain 45 85 IPR013210 -
Acco06g0655 1046 Pfam Leucine rich repeat 185 245 IPR001611 GO:0005515
Acco06g0655 1046 Pfam Leucine rich repeat 667 727 IPR001611 GO:0005515
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 448 520 IPR032675 -
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 43 179 IPR032675 -
Acco06g0655 1046 SUPERFAMILY Protein kinase-like (PK-like) 862 1021 IPR011009 -
Acco06g0655 1046 ProSiteProfiles Protein kinase domain profile. 669 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0655 1046 SUPERFAMILY L domain-like 549 785 - -
Acco06g0655 1046 SMART LRR_typ_2 208 231 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 690 714 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 642 666 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 232 256 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 111 135 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 763 787 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 473 496 IPR003591 -
Acco06g0655 1046 SMART LRR_typ_2 304 328 IPR003591 -
Acco06g0655 1046 FunFam Nuclear pore complex protein NUP107 43 175 - -
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 521 801 IPR032675 -
Acco06g0655 1046 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 421 518 - -
Acco06g0655 1046 FunFam Leucine-rich repeat receptor-like protein kinase TDR 520 792 - -
Acco06g0655 1046 SUPERFAMILY L domain-like 44 317 - -
Acco06g0655 1046 ProSitePatterns Tyrosine protein kinases specific active-site signature. 879 891 IPR008266 GO:0004672|GO:0006468
Acco06g0655 1046 Gene3D Ribonuclease Inhibitor 375 447 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0655 Acco-ChrAcco06 4222888 4226608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0655 863 927 Receptor kinase-like Gene Family AT4G08850 49.231 1.71e-17 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g0655 PK_Tyr_Ser-Thr 2.1e-22 CL0016