Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0650 ATGGGGGATAGGATCAGAGCAGATAGGAAACGCAATACCAAGAAAGGTGTGCGGAAGGTATTGAAGTGCCTATCATGCTCAGAGGAGCCATCAAGAGAAGAAGATGATATGGTTCTTTCATCTGAACCTTTTGCAAACGAGGGTTGTTCAGCAAATGGGATTTCTTTTCAGACCAGTCAAATTGATGATATGCCAGATAATAGAAATATTGAGGAAATCGAATCATCCCTTTGTGGGAGTGGTTGTTTGAATTATGAGGAAGCTAGAGCGCGTTTAGGAAAATATGAATATCAGAAAGGAAATATAGAAGCTGCTTTACGTTTTCTTGAGCGAATGGATACGGAGGTTGTAACTTCCATGATTAAAAGTTCTCTTGCCAAAAGGGGAAAGCAACACAAGAGACTTCGCCAGAAATATGCTACTCGGTCATTGTCCATTCATTCTGCTAGCTTACTGTTGGAAGCATTATTCCTAAAAGCAAAGTCTCTGCAGGCTCTTGGAAAGTTTAAAGAAGCTGCCCTATCTTGCAAAGTTATTCTGGATATGGTTGAATCTTCATTACCCCAAGGCTTGCCTGAAAACTTTGGTGTTGGATGTAAATTGCAGGAGACTCTGAGCAAGGTGATTGAGTTGCTGCCTGAATTGTGGAAACTTGCCGATAGTCCACATGAAGCTATTATGTCCTACCGCCGGGCACTTCTTCATAAGTGGAATCTTAATGTAGAAACCAAAGCAAAGATTCAGAAAGAGTTTTCTGTTTTTCTTCTATTTAGTGGAGAGGAAGCAAGTCCTCCCAGTCTTCGTTCCCAAATGGACACTTCATATGTACCCAGAAATAACATAGAAGAGGCTATACTTCTTTTGATGATTCTGTTAAGACAGGTCTGTTCCGATAGAATTGAGTGGGATCCTTCAATTTTGGATCATCTTTCATTTGCTTTGTCTGTTTCAGGGGATTTGACGGCTTTAGCCAATCAATTGGAACTATTGCTCCCCTCCACTGTCAATCCAACAGAAAAATGCGAAACAATTGCTTTCTGTTATTATGGAGCAGGTCAGGATTCGGTGGCATTGGGACTTCTTAAAAAATTGTTATGTAGGAGAGAGGACCCAAAACATGTTTTAGCTTTGTTAATGGCTTCAAAGATTTGTTGTGAGAACCCTAATCTTGCTGGAGAAGGAATAAATTTTGCTTGCAGATTGCTTGAGAAATTGGAAGGAAGATGTGATCAGTTAGCAAGTTCTGCCAATTGCTTCCTTGGTCTTTCACTTTCAACGCAGTCAAAATTGTCCGTTTCTGATTCTGAGAGGGATAAAAGACAATCTGAGGCACTTCACAGCCTGGAAATTGCCACCAGAATGTCTAGAATGAGAAACCCCCTAATATTATACCATCTCAGTTTAGAATATGCTGAACAGAGAAAGTTGGATGCTGCCCTTTATTATGCCAAATGCTTGCTAGAACTGGAAGCAGGGTCTAATGTTAAAGGATGGTTATTATTAGCCAGGATATTATCAGCTCAAAGTCGATTTTTGGATGCTCAATCTGTTATTGATGCTGCTTTGGACCAGACTGGGAAATGGGAACAAGGAAATTTGCTGCGAACGAAAGCTAAACTTCAGATTGCCCAGGTCCATTTAAGGAGTGGCATGGAAACGTATATTCAGCTTCTTGCTGTTCTTCAAATTCAGATCAGAAACTTCGGTTCCGAGAAGAAGCTAAATAAAAAAGATGATATCCAGGAATTGGAATTGGAAATATGGCATGATCTTGCTTTCTTATACATAAGCCAGTCAAAATGGCATGATGCAGAAGCGTGTCTTTCAAAGTCTAAGGCCATCAAACTATACTCTGCTTCTAGATGTCACGCAACTGGTCTAATATATGAAGCAAAGGGCCTTTATAAAGAGGCTCTAAAAGCTTATCGGGAAGCTTTGGATATTGATCCCAACCATGTCCCAAGCTTGGTTTCTAGTGCTCTGGTTCTCAGAAGGTGCGGTAGTAAAAAATTGAATGCTGCAGTTCAAGGCTATCTTATGGATGCTCTGAGGCATGACCGGATGAACGCTTCTGCTTGGTACCATCTTGGCCGTCTGCACAAGGCTGAGGATTCTGTATCTTCCTTAATGGAAGCCATGGAATGTTTCCAGGCTGCATACTTTCTTGAAGAAACTGCACCAGTTGAGCCTTTCCGATGA 2199 0.4106 MGDRIRADRKRNTKKGVRKVLKCLSCSEEPSREEDDMVLSSEPFANEGCSANGISFQTSQIDDMPDNRNIEEIESSLCGSGCLNYEEARARLGKYEYQKGNIEAALRFLERMDTEVVTSMIKSSLAKRGKQHKRLRQKYATRSLSIHSASLLLEALFLKAKSLQALGKFKEAALSCKVILDMVESSLPQGLPENFGVGCKLQETLSKVIELLPELWKLADSPHEAIMSYRRALLHKWNLNVETKAKIQKEFSVFLLFSGEEASPPSLRSQMDTSYVPRNNIEEAILLLMILLRQVCSDRIEWDPSILDHLSFALSVSGDLTALANQLELLLPSTVNPTEKCETIAFCYYGAGQDSVALGLLKKLLCRREDPKHVLALLMASKICCENPNLAGEGINFACRLLEKLEGRCDQLASSANCFLGLSLSTQSKLSVSDSERDKRQSEALHSLEIATRMSRMRNPLILYHLSLEYAEQRKLDAALYYAKCLLELEAGSNVKGWLLLARILSAQSRFLDAQSVIDAALDQTGKWEQGNLLRTKAKLQIAQVHLRSGMETYIQLLAVLQIQIRNFGSEKKLNKKDDIQELELEIWHDLAFLYISQSKWHDAEACLSKSKAIKLYSASRCHATGLIYEAKGLYKEALKAYREALDIDPNHVPSLVSSALVLRRCGSKKLNAAVQGYLMDALRHDRMNASAWYHLGRLHKAEDSVSSLMEAMECFQAAYFLEETAPVEPFR 732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0650 732 SMART tpr_5 690 726 IPR019734 GO:0005515
Acco06g0650 732 SMART tpr_5 585 618 IPR019734 GO:0005515
Acco06g0650 732 SMART tpr_5 460 493 IPR019734 GO:0005515
Acco06g0650 732 SMART tpr_5 495 528 IPR019734 GO:0005515
Acco06g0650 732 SMART tpr_5 153 186 IPR019734 GO:0005515
Acco06g0650 732 SMART tpr_5 619 652 IPR019734 GO:0005515
Acco06g0650 732 Pfam Tetratricopeptide repeat 622 652 IPR013105 -
Acco06g0650 732 ProSiteProfiles TPR repeat profile. 619 652 IPR019734 GO:0005515
Acco06g0650 732 SUPERFAMILY TPR-like 345 530 IPR011990 GO:0005515
Acco06g0650 732 Gene3D Tetratricopeptide repeat domain 572 727 IPR011990 GO:0005515
Acco06g0650 732 Gene3D Tetratricopeptide repeat domain 81 564 IPR011990 GO:0005515
Acco06g0650 732 SUPERFAMILY TPR-like 585 702 IPR011990 GO:0005515
Acco06g0650 732 PANTHER PROTEIN NPG1 25 732 IPR043376 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0650 Acco-ChrAcco06 4188125 4191486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0650 11 732 Calmodulin-binding Proteins AT4G28600 52.789 0.0 709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0650 06 4188125 4191486 Acco02g1710 02 13144573 13149248 CCT