Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0642 ATGGATTCCGCAAGGAGCTGGTTGCAAAAGTTACAACCACGAGATAAAATGAAATCATCATCAAAGAAAAAGGACGATAGTGCTGGAGTAGATCCAAATCAACCGGTAGATGAAGAAGCTCTTTCCAGTACCACAAAACAGAAGGTTGCTGCAGCCAAGCAGTACATTGAGAACCATTACAAGGAGCAAATGAAGAACCTTCAGGAGAGGAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCAGAAGAAGATCAAAACAACCTTCTTAAGTTTTTGGAGAAGAAGGAAACAGAATATATGCGCCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAGTTATTAACTATGATCGGAAAAGGTGCATTTGGAGAGGTTAGGATCTGCAGGGAAAAGACGACAGGCAGTGTTTATGCTATGAAAAAGCTAAAAAAATCAGAGATGCTTCGTAGAGGCCAGGTAGAGCATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGACAGCAATTGTATAGTCAAACTTTATTGTTCTTTCCAGGATGATGAGTATCTGTATCTTATCATGGAGTATCTTCCTGGTGGAGATATGATGACCCTTCTTATGAGAAAGGACACCTTGACTGAAGATGAAGCCAGATTTTATGTTGCTGAAACAGTTCTGGCTATTGAATCTATTCATAAACACAATTATATCCATCGGGATATCAAGCCTGATAATTTGTTACTTGATAAATATGGACACATGAAACTTTCAGATTTTGGACTATGTAAACCATTGGATTGCAGCACGCTTCAAGAAGATGATTTTTCAGTTGGTCAGAATGCAAATGGATCTACACAGAATGATGAACGCTCAGCTCCAAAACGCACACAACAAGAAGTACTACAACACTGGCAAAAGAACAGAAGAACACTCGCTTATTCTACTGTTGGCACACCTGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGCTATGGAATGGAATGTGACTGGTGGTCGCTTGGAGCCATTATGTATGAAATGCTGGTGGGGTATCCTCCTTTCTATTCGGATGATCCAATGTCAACATGTAGAAAGATAGTAAGTTGGAAATCTCACTTGAAGTTTCCAGAAGAGGCAAGGCTATCTCCAGAGGCTAAAGATCTTATTTGTAAACTTTTGTGCAATGTCAACCACAGACTAGGGTCAAATGGTGCTGATGAAATTAAGGCTCATCCATTCTTCAGAGGTGTGGAATGGGATAAACTCTATCAAATGGAAGCTGCATTTATTCCTGAGGTCAATGATGAATTAGATACTCAGAACTTTGAGAAGTTTGAAGAGGCAGACATCCAAAGTCACCAAGCATCAAGATCTGGGCCTTGGAGAAAGATGCTCTCGTCTAAGGACTTAAATTTTGTTGGGTACACATACAAGAATTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAGGAAATCCTCCAAATCAAAGAGGCCATCTATCAAGTCACTTTTTGAGGGTGAGTCAGAAACATCAGAGGTGTCTCCTTCTTCAGATGCGCCTGCAGGCAATCGATCTGCTCAAGGGAGCTTCCTAAACCTCTTGCCGCCCCGTTATGAGGTATCTAATAAAAGTAAGGAAACCTCCTAA 1671 0.4081 MDSARSWLQKLQPRDKMKSSSKKKDDSAGVDPNQPVDEEALSSTTKQKVAAAKQYIENHYKEQMKNLQERKERRTILEKKLADADVSEEDQNNLLKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRICREKTTGSVYAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVAETVLAIESIHKHNYIHRDIKPDNLLLDKYGHMKLSDFGLCKPLDCSTLQEDDFSVGQNANGSTQNDERSAPKRTQQEVLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVSWKSHLKFPEEARLSPEAKDLICKLLCNVNHRLGSNGADEIKAHPFFRGVEWDKLYQMEAAFIPEVNDELDTQNFEKFEEADIQSHQASRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKRKSSKSKRPSIKSLFEGESETSEVSPSSDAPAGNRSAQGSFLNLLPPRYEVSNKSKETS 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0642 556 PANTHER SERINE/THREONINE-PROTEIN KINASE 32 474 - -
Acco06g0642 556 MobiDBLite consensus disorder prediction 497 511 - -
Acco06g0642 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 237 249 IPR008271 GO:0004672|GO:0006468
Acco06g0642 556 MobiDBLite consensus disorder prediction 512 538 - -
Acco06g0642 556 Coils Coil 60 80 - -
Acco06g0642 556 FunFam Non-specific serine/threonine protein kinase 89 201 - -
Acco06g0642 556 FunFam Non-specific serine/threonine protein kinase 202 269 - -
Acco06g0642 556 SUPERFAMILY Protein kinase-like (PK-like) 91 469 IPR011009 -
Acco06g0642 556 Gene3D Transferase(Phosphotransferase) domain 1 202 434 - -
Acco06g0642 556 CDD STKc_NDR_like 116 480 - -
Acco06g0642 556 ProSitePatterns Protein kinases ATP-binding region signature. 124 147 IPR017441 GO:0005524
Acco06g0642 556 SMART serkin_6 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0642 556 FunFam Non-specific serine/threonine protein kinase 315 434 - -
Acco06g0642 556 ProSiteProfiles Protein kinase domain profile. 118 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0642 556 MobiDBLite consensus disorder prediction 9 31 - -
Acco06g0642 556 MobiDBLite consensus disorder prediction 497 556 - -
Acco06g0642 556 CDD MobB_NDR_LATS-like 52 113 - -
Acco06g0642 556 ProSiteProfiles AGC-kinase C-terminal domain profile. 417 489 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco06g0642 556 Gene3D Phosphorylase Kinase; domain 1 116 445 - -
Acco06g0642 556 SMART pkinase_C_6 417 481 IPR000961 GO:0004674|GO:0005524|GO:0006468
Acco06g0642 556 Pfam Protein kinase C terminal domain 435 479 IPR017892 GO:0004674|GO:0005524|GO:0006468
Acco06g0642 556 MobiDBLite consensus disorder prediction 1 45 - -
Acco06g0642 556 Pfam Protein kinase domain 119 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0642 Acco-ChrAcco06 4144907 4150997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0642 1 547 AGC Kinase Gene Family AT4G14350 77.231 0.0 858
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Acco06g0642 Pkinase 8.6e-65 CL0016