Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0636 ATGGGTCTGAGAGATATAGGAGCATCACTTCCTCCCGGGTTTCGATTCTATCCGAGCGATGAGGAGCTGGTGTGTCATTACCTGTACAAGAAGATCACCAATGAGGAAATTCTCAAGGGCACTTTGGTTGAAATTGACTTGCATACTTGCGAACCATGGCAGCTTCCAGAGGTGGCGAAGCTGAACGCAAACGAATGGTACTTCTTCAGCTTCCGTGACCGTAAATACGCCACAGGATTCCGGACGAATAGGGCGACGACATCTGGATATTGGAAAGCGACAGGGAAGGACAGGACAGTGCTGGACCCAATCACACGCGAGGTTGTAGGGATGAGGAAGACGCTCGTGTTCTACAGGAACAGAGCCCCCAATGGTATGAAAACTGGTTGGATCATGCATGAGTTTCGCTTGGAGACCCCACACATGCCCCCCAAGGAGGACTGGGTTTTGTGTAGAGTATTTCACAAAAGCAGAGCAGACAACAACAGTGCCAAACTCAGCCCACTGGATATTTTTGAGACCGCACCTTCATATACTTTTCCTTCTTCGTCTCCAACCAATCCAAATCAGCCTCCTGGCTTCTCCACTTTCACCTCCATGCCACATCATGATTACCAATACCAGAACCAACCCAGTTCACTGATGAATCTCCTTCAATTCTCTCGGGAAACAAACACCCACAACATTACAAGTACTGTGACTACTCAAACTATTCCGATGAAAGGAGATCATGTTGAATATGACGATGAGTTCTTATGGGACATGGACCTGGAAGAAAACAGCATCCACCACCACCACAGTGACGTGGCCTCAGATCTGGATGGAATGAGATTCGAGGTTGATGATGATAGTATGGTCTTGTTATAA 867 0.4752 MGLRDIGASLPPGFRFYPSDEELVCHYLYKKITNEEILKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVLDPITREVVGMRKTLVFYRNRAPNGMKTGWIMHEFRLETPHMPPKEDWVLCRVFHKSRADNNSAKLSPLDIFETAPSYTFPSSSPTNPNQPPGFSTFTSMPHHDYQYQNQPSSLMNLLQFSRETNTHNITSTVTTQTIPMKGDHVEYDDEFLWDMDLEENSIHHHHSDVASDLDGMRFEVDDDSMVLL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0636 288 Gene3D NAC domain 19 160 IPR036093 GO:0003677|GO:0006355
Acco06g0636 288 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
Acco06g0636 288 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Acco06g0636 288 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 221 - -
Acco06g0636 288 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Acco06g0636 288 MobiDBLite consensus disorder prediction 179 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0636 Acco-ChrAcco06 4103802 4107711 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0636 6 241 NAC Transcription Factor Family AT1G56010 47.755 2.05e-66 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g0636 NAM 1.1e-37 No_clan