Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Acco06g0633 | ATGCCATCCCTGATTTCTCCTGGGAAAATCCATCGCTTGGAGATGGATAATTTCAAGTCTTACAAGGGTCTTCAAGTCATTGGTCCCTTCTACGACTTCACCGCAATTATTGGCCCCAATGGTGCTGGCAAGTCGAACCTTATGGACGCTATTAGCTTTGTGCTTGGTGTAAGGACAGGCCAGCTGCGTGGTGCTCAACTCAAGGATTTAATCTACGCGTATGACGACAAGGAAAAGGAGCAGAAGGGACGGAGGGCATTCGTTCGTTTGGTTTATCAGCTGGGCAATGGGTCGGAGATCCAGTTCACCAGGACTATCACGAGCGCCGGCGCGAGCGAGTACCGGATTGATGGGAGCCCTGTAACGTGGGATGTGTATAATGCTAGGCTTAAGTCACTTGGCATTCTTGTCAAGGCTCGCAATTTCCTCGTGTTTCAGGGTGATGTGGAATCCATTGCATCGAAGAATCCGAAAGAGCTCACTGCCCTTCTTGAGCAGATATCTGGCTCTGATGAGCTCAAGAGAGACTATGAGCGGTTTGAAGAAGAAAAAGCCACGGCTGAAGAAAAATCAGCCCTCGTTTTTCAGAGGAGGAAGACTGTAAGTTTGGAAAGAAAACAGAAGAAGGTGCAAAAAGAAGAAGCAGAGAAACATATTCGTTTGCAGAATCAACTGAGAACCATAAAGGAAGAGCATTTCTTGTGGCAATTATTCAATATAGAAAGAGATATTGAAAAGACAACTGATGGTCTTGAGGATGAGAAAAGAAGTCGAGAAGGTGTTATGGAAGAACTGGAAAAATTTGAAGCTGAAGCTAGTAAAAAGAAGAAAGAACAGGCAAAATATCTGAAAGAGATTACACAATGTGAAAGGAGAATTGGTGAGAAAAGCAACAAACTTGATAAGAATCAACCTGATCTTCTGAAGTTGAAAGAGGAAATGGCTCGTATTAACTCAAAAATTAAAAAAGGGAAGAAGGAGCTAGACAGAAAAAGGGAAGAACGGAGAAAACATGCTAATGATATAACGGAGCTACAGAGGGGCATACAAGATCTCACTGCCAAATTGGAGGATCTACAGGAAAAGAGTCGAGATGCTGGTGATGAACTAAAGTTAGATGGCAGTGACTTGGAGGAATATTTTCGAATCAAAGAGGAAGCTGGGATGAAAACTGCAAAGTTAAGGGAGGAGAAAGAACTTCTGGATAGGCAACAACATGCAGATAGTGAAGCTCAAAAAAATTTGGATGAAAATCTTCAACAATTAAGGAATAGGGAGTCTGAATTGATTTCACAGGAAGAACAGATGCGAACTAGGTTGAAAAAAATTCTTGATAATTCTACAAAACATAAGGATGACAAAGCAAATTTAGAGAAAGAATTGCGTGTCATGCAGGACAAACATCGAGATTCCAGGAAGAAATATGACAATTTGAAGTTGAAAATTGGTGAAATAGAAAATCAACTTCGAGAACTGAGGGCTGATCGATATGAAAATGAGAGAGATGCAAAATTGTCTCAAGCTGTGGAGAGCCTCAAACGCCTGTTTCAAGGAGTCCATGGTCGCATGACTGATCTTTGTAGGCCAACACAGAAGAAGTATAACCTAGCTGTTACTGTTGCTATGGGTAAATTTATGGATGCGGTTGTAGTTGAGGATGAAAAGACTGGAAAGGAATGCATCAAGTATTTGAAAGATCAGAGGCTTCCTCCTCAGACATTTATTCCTTTGCAATCAGTTCGTGTGAAGCCGATTATTGAAAGGTTGCGCACATTAGGTGGCACAGCAAAGCTGTCCAAGTTTGATCCTGCCTTGGAGAAGGCAATTCTCTTTGCTGTCGGGAATACTCTTGTTTGTGACGATCTTGAGGAGGCCAAAGTCTTGAGCTGGAGTGGTGAGAGGTTCAAAGTTGTAACTGTGGATGGGACTCTGCTGACAAAATCTGGCACAATGACTGGTGGCACTAGTGGTGGAATGGAGGCTAGGTCAAAACAGTGGGATGACAAAAAGATTGAAGGCCTTAAAAAAAAGAAAGAGCAGTATGAATCAGAGTTGGAGGAAGTAGGATCAATAAGAGATATGCAACTTAAGGAGTCTGAAGCATCTGGAAAAATTAGTGGACTTGACAAGAAAATTCATTATGCAGATATTGAGAAGCAAAGCATTGAGGATAAGCTTTTAAATTTGAAGCGAGAGAAAGAGATAATCAAAGGAGAAATCGAACGGATCAGTCCAGAACTTCAGAAGTTAAATGGCATTGTTGAAAAGAGGAATGCTGACATTCGTAAGCTGGAGAAGAGGATCAATGAAATTACTGATAGGATTTACAGAGATTTCAGCAAGTCGGTTGGGGTTGCCAACATTCGTGAGTATGAAGAAAATCAACTCAAGTCAGCTCAAAATGTAGCAGAGGAGAGGCTGAGCTTGAGCAGCCAGCTATCAAAGTTAAAATATCAGCTGGAGTATGAACAAAATCGGGATATGACCACACGAATTAGAGAACTTGAATCTTCTTTGAGTGCCCTTGAACATGACTTAAGACAGGTACAGCACAGAGAGGCTGAAACAAAGTCGGCAGCTGAAAAAGCTACTGAAGACATTAACCAGTTTAAGGAAGAAATTCAGGAGTGGAAATCTAAGTCTGAAGATTGTGAGAAAGATATCCAAGAGTGGAAGAAGCGTGCTTCTTCAGCCACAACAAGCATATCTAAACTCAATCGTCAGATAAACTCAAAGGAGGCCCAGATTGAGCAGTTAATTGTGCAGAAGCAAGAAATTGTAGAGAAGTGTGAACTAGAACAACTTAGCTTGCCAATTATAGAAGATCCAATGGATACTGGTACTTCAATACCAGGTCCGGTTTTTGACTTTGGTCAACTAAGTCGGGCTCTGAAGGATAGGAGGAACTCTGACAGAGACAAAATTGAGGTTGAGTTTAGGCAAAAAATGGATTCCCTGACATCTGAAATTGAAAGAACGGCACCAAATTTGAAGGCATTAGATCAATATGAAGCTCTGCTGGAAAAGGAAAGAGCTGTAAATGAAGAGTATGAAGTTGTCAGGAAAGAGGAGAGCGAGAAGTCTGCAAGGTTCACTGCAGTTAAGCAGAAGAGGTATGAGTTGTTCATGGACGCTTTCAACCACATATCCGGTAATATAGATAAAATATACAAACAACTTACAAAGAGCAACACACATCCGCTGGGAGGAACAGCATACTTAAACTTGGAAAATGAAGATGATCCATTTCTGCATGGCATCAAGTACACTGCTATGCCCCCAACAAAGCGATTCCGTGATATGGAGCAGCTATCTGGTGGGGAAAAGACTGTTGCTGCACTTGCTTTGCTATTCTCCATCCACAGTTACAAGCCTTCACCTTTTTTCATATTGGACGAAGTTGATGCTGCATTGGACAACTTAAATGTTGCAAAGGTTGCTGGATTTATTCGTTCGAAATCTTGTGAGGGAGCAGGGGCTAGTCAAGATGTTGATGGTGGCAGTGGCTTTCAAAGTATTGTGATATCCTTGAAAGACACCTTTTATGACAAAGCTGAAGCATTGGTTGGGGTTTACCGTGACTCAGAGAGAGGCTGTTCGAGAACGCTGACATTTGACCTGACCAAATACCGCGAGTCCTAA | 3642 | 0.4185 | MPSLISPGKIHRLEMDNFKSYKGLQVIGPFYDFTAIIGPNGAGKSNLMDAISFVLGVRTGQLRGAQLKDLIYAYDDKEKEQKGRRAFVRLVYQLGNGSEIQFTRTITSAGASEYRIDGSPVTWDVYNARLKSLGILVKARNFLVFQGDVESIASKNPKELTALLEQISGSDELKRDYERFEEEKATAEEKSALVFQRRKTVSLERKQKKVQKEEAEKHIRLQNQLRTIKEEHFLWQLFNIERDIEKTTDGLEDEKRSREGVMEELEKFEAEASKKKKEQAKYLKEITQCERRIGEKSNKLDKNQPDLLKLKEEMARINSKIKKGKKELDRKREERRKHANDITELQRGIQDLTAKLEDLQEKSRDAGDELKLDGSDLEEYFRIKEEAGMKTAKLREEKELLDRQQHADSEAQKNLDENLQQLRNRESELISQEEQMRTRLKKILDNSTKHKDDKANLEKELRVMQDKHRDSRKKYDNLKLKIGEIENQLRELRADRYENERDAKLSQAVESLKRLFQGVHGRMTDLCRPTQKKYNLAVTVAMGKFMDAVVVEDEKTGKECIKYLKDQRLPPQTFIPLQSVRVKPIIERLRTLGGTAKLSKFDPALEKAILFAVGNTLVCDDLEEAKVLSWSGERFKVVTVDGTLLTKSGTMTGGTSGGMEARSKQWDDKKIEGLKKKKEQYESELEEVGSIRDMQLKESEASGKISGLDKKIHYADIEKQSIEDKLLNLKREKEIIKGEIERISPELQKLNGIVEKRNADIRKLEKRINEITDRIYRDFSKSVGVANIREYEENQLKSAQNVAEERLSLSSQLSKLKYQLEYEQNRDMTTRIRELESSLSALEHDLRQVQHREAETKSAAEKATEDINQFKEEIQEWKSKSEDCEKDIQEWKKRASSATTSISKLNRQINSKEAQIEQLIVQKQEIVEKCELEQLSLPIIEDPMDTGTSIPGPVFDFGQLSRALKDRRNSDRDKIEVEFRQKMDSLTSEIERTAPNLKALDQYEALLEKERAVNEEYEVVRKEESEKSARFTAVKQKRYELFMDAFNHISGNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTAMPPTKRFRDMEQLSGGEKTVAALALLFSIHSYKPSPFFILDEVDAALDNLNVAKVAGFIRSKSCEGAGASQDVDGGSGFQSIVISLKDTFYDKAEALVGVYRDSERGCSRTLTFDLTKYRES | 1213 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Acco06g0633 | 1213 | Pfam | RecF/RecN/SMC N terminal domain | 10 | 1194 | IPR003395 | - | |
Acco06g0633 | 1213 | Coils | Coil | 170 | 190 | - | - | |
Acco06g0633 | 1213 | Coils | Coil | 825 | 929 | - | - | |
Acco06g0633 | 1213 | Coils | Coil | 747 | 774 | - | - | |
Acco06g0633 | 1213 | Pfam | SMC proteins Flexible Hinge Domain | 517 | 627 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Acco06g0633 | 1213 | Coils | Coil | 307 | 369 | - | - | |
Acco06g0633 | 1213 | Coils | Coil | 412 | 502 | - | - | |
Acco06g0633 | 1213 | Coils | Coil | 251 | 285 | - | - | |
Acco06g0633 | 1213 | Gene3D | - | 8 | 230 | IPR027417 | - | |
Acco06g0633 | 1213 | Gene3D | - | 953 | 1212 | IPR027417 | - | |
Acco06g0633 | 1213 | PIRSF | SMC | 8 | 1210 | IPR024704 | GO:0005524|GO:0016887 | |
Acco06g0633 | 1213 | Gene3D | - | 496 | 577 | - | - | |
Acco06g0633 | 1213 | SMART | SMC_hinge_2 | 517 | 629 | IPR010935 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Acco06g0633 | 1213 | FunFam | Structural maintenance of chromosomes 1A | 9 | 224 | - | - | |
Acco06g0633 | 1213 | CDD | ABC_SMC1_euk | 10 | 157 | IPR028468 | GO:0005524|GO:0007062|GO:0008278|GO:0016887 | |
Acco06g0633 | 1213 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 890 | 1196 | IPR027417 | - | |
Acco06g0633 | 1213 | Coils | Coil | 1000 | 1023 | - | - | |
Acco06g0633 | 1213 | CDD | ABC_SMC1_euk | 1092 | 1207 | IPR028468 | GO:0005524|GO:0007062|GO:0008278|GO:0016887 | |
Acco06g0633 | 1213 | Coils | Coil | 211 | 231 | - | - | |
Acco06g0633 | 1213 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 9 | 266 | IPR027417 | - | |
Acco06g0633 | 1213 | Coils | Coil | 719 | 739 | - | - | |
Acco06g0633 | 1213 | SUPERFAMILY | Smc hinge domain | 481 | 678 | IPR036277 | GO:0005515|GO:0005524|GO:0005694|GO:0051276 | |
Acco06g0633 | 1213 | Coils | Coil | 671 | 691 | - | - | |
Acco06g0633 | 1213 | PANTHER | STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER | 10 | 1213 | - | - | |
Acco06g0633 | 1213 | Gene3D | - | 578 | 656 | - | - | |
Acco06g0633 | 1213 | Gene3D | - | 786 | 929 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Acco06g0633 | Acco-ChrAcco06 | 4060547 | 4070550 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Acco06g0633 | 7 | 329 | Structural Maintenance of Chromosomes family | AT5G15920 | 26.061 | 2.07e-09 | 60.1 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Acco06g0633 | 06 | 4060547 | 4070550 | Acco06g0633 | 06 | 4060547 | 4070550 | ECH |