Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0629 ATGGGGAGAGGTCCGTGCTGTGAGAAAATGGGATTGAAGAAAGGACCTTGGTCCGCAGAAGAAGACCACCTACTCATCAATTACATCCAATCCCACGGTCACTCCAATTGGCGAGCCCTTCCCAAACAAGCTGGGCTTTTAAGGTGTGGCAAGAGTTGCAGACTGCGATGGACCAACTATTTGAGGCCTGATATCAAACGCGGCAACTTCACCCCCGAAGAAGAGAACACCATCTTCCGCTTGCACCGTCTCTTGGGAAACAGATGGTCGGCAATTGCAGCGAGATTACCGGGACGCACAGACAATGAAATAAAAAATGTGTGGCACACCCACTTGAAGAAGAGGCTACCACTCAACCAACAACACCTCCCCACTACTCGCAACCCTAAACACAACAGACAAAACCCCGTGACTTCTTCCTCCGATGACGACGACAACACAGTGATGAAAACCCCACAATGCTCTATCAGTATCAGTGATGCCTCCACCCTCACTACCACTGACAACATCGAACCAAACAGTGACGACATCTACACAAATCATGTCGAAATGCTGACCCATAATATCGATACGTCTTTGGACGAGGATTTCTGGTCAGAAGTCCTGTCGGCTGATAATTCCGGCGAAAGCAGCCAACTTGAAGGCGTGGGTGCTTATGCCGCTGATCCACACTTCCAATTTCCACTTTCTCCTGAAGCGGCAAGTATTTGCGATGGTTTTAACATGGACTTTTGGGATGGTCATGTTTACACCAGAGCCCACGAGTTAACTGGTTATTACCACAATTATGATATTCATCTGTAA 804 0.4813 MGRGPCCEKMGLKKGPWSAEEDHLLINYIQSHGHSNWRALPKQAGLLRCGKSCRLRWTNYLRPDIKRGNFTPEEENTIFRLHRLLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLPLNQQHLPTTRNPKHNRQNPVTSSSDDDDNTVMKTPQCSISISDASTLTTTDNIEPNSDDIYTNHVEMLTHNIDTSLDEDFWSEVLSADNSGESSQLEGVGAYAADPHFQFPLSPEAASICDGFNMDFWDGHVYTRAHELTGYYHNYDIHL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0629 267 SMART sant 13 63 IPR001005 -
Acco06g0629 267 SMART sant 66 114 IPR001005 -
Acco06g0629 267 CDD SANT 69 112 IPR001005 -
Acco06g0629 267 CDD SANT 16 61 IPR001005 -
Acco06g0629 267 MobiDBLite consensus disorder prediction 119 148 - -
Acco06g0629 267 FunFam MYB-related transcription factor 13 66 - -
Acco06g0629 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Acco06g0629 267 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Acco06g0629 267 Gene3D - 69 141 - -
Acco06g0629 267 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Acco06g0629 267 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Acco06g0629 267 SUPERFAMILY Homeodomain-like 10 108 IPR009057 -
Acco06g0629 267 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Acco06g0629 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Acco06g0629 267 MobiDBLite consensus disorder prediction 115 148 - -
Acco06g0629 267 Gene3D - 11 67 - -
Acco06g0629 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0629 Acco-ChrAcco06 4044115 4046945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0629 1 212 MYB Transcription Factor Family AT2G31180 57.075 5.18e-81 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g0629 Myb_DNA-binding 3.1e-14 CL0123