Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0621 ATGGAAGAGGGCAATGGAAGGTCAAGTGTTAATGGTGACGTGAGATACAGAGGGATCCGGAGGAGGCCGTGGGGCAAGTTTGCTGCTGAGATCCGTGATCCGACCCGGAAGGGAACTCGCATTTGGCTTGGAACATTCGAGACCGCCGAGGAGGCTGCCAGGGCTTACGACGCCGCCGCCTTTCATTTCAGGGGCCACCGCGCTATTCTCAATTTCCCCAACGACCATCAGTCTCTTCATCCTCCCACTTCGTCACTGCCCCTGCCCTCCTCCTCTTCCTCCTCCTCCTCCTCCTCCTCGAGAATTCCACCGCCCGACGCCGACGGTGCCGTGGAGTTTGAGTGCTTGGACAACAACTTGCTGGATGAACTCCTCCAACAACAAGTATACACCCACCCTAACTTACCCAAGTGA 414 0.57 MEEGNGRSSVNGDVRYRGIRRRPWGKFAAEIRDPTRKGTRIWLGTFETAEEAARAYDAAAFHFRGHRAILNFPNDHQSLHPPTSSLPLPSSSSSSSSSSSRIPPPDADGAVEFECLDNNLLDELLQQQVYTHPNLPK 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0621 137 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 Pfam AP2 domain 15 66 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 MobiDBLite consensus disorder prediction 76 103 - -
Acco06g0621 137 MobiDBLite consensus disorder prediction 72 110 - -
Acco06g0621 137 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Acco06g0621 137 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Acco06g0621 137 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Acco06g0621 137 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Acco06g0621 137 PANTHER DNA-BINDING DOMAIN 15 125 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0621 Acco-ChrAcco06 4010628 4011041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0621 14 128 AP2-EREBP Transcription Factor Family AT3G23230 59.504 4.14e-39 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g0621 AP2 1.5e-14 CL0081