Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0620 ATGGCTACCTCGGACTCTGCTTTACCCGTATTCGCCATCGTTGTGCTCAGCATCATGGCCACAGCTTTCTTGCTCATCGGCTACTTCACCTTCGTCACCAAATGTTGCTCTTACTGGCACCACCTCAACCCTCTCACTTGGCTTTCCATTCTGCGTCCCAGACACAGCGAAGACCCCTTCATAGCTCTCTCCCCCGCCACGTGGAATCGAGGCCTTGATGAATCCCTCATCCGAGAAATTCCCACATTGCAGTTCGTCAAAGGTGAGGGTCATGATTTGACTACTGTGTATGGGTGTGTGGTGTGTTTGAATGAGTTTCAGCAACAGGACATGCTCAAGATTCTGCCTAAATGCAGCCATGCTTTTCACTTGGACTGTATCGATATTTGGCTTCAGACCAACGCCAATTGTCCTCTTTGCAGATCAAGCATTTCTGGCACGGCGCGTCCTCCATTGGATCATATTGTAGCACCAAGCTCTTCTCCTCAGGATTCTCAGTTACTCTCCAATATGGGTAGTGATGAAGACTTTGTGGTCATTGAATTGGGGGGAGAAGATGGGGGATCACTGTCACCGAGGCCACATGAACGAAATCTGTCAGGTGGGGGAAGCTTGGGCCAGAGTAGAAGTCACTCTGCGAGGAAGATGGAGCAGAAGATCGGGCACTTGAAATCGAGGAAGTGGCACCACGTGTCGATCATGGGAGATGAGTGTATTGATACGAGGAAGAAAGATGAACAGTTCTGTATTCAACCCCTTAGGAGATCTTTCTCCATGGATTCTGCAAATGATAGGCAAGTTTACTTGGAAGTTCAGGCCATTACACAGCAGTCAAATAGGCATCAGAACGAGGCTAGTGGGAGTGAAGACAGTAACAGTAATAGCAGAGGTCGAAGGTCTTTCTTTCCATTTCGTTATGGTCGAGGATCCAAAAACGCAGTACTTCCTCTGGAGAACGAGGTCTGA 966 0.4865 MATSDSALPVFAIVVLSIMATAFLLIGYFTFVTKCCSYWHHLNPLTWLSILRPRHSEDPFIALSPATWNRGLDESLIREIPTLQFVKGEGHDLTTVYGCVVCLNEFQQQDMLKILPKCSHAFHLDCIDIWLQTNANCPLCRSSISGTARPPLDHIVAPSSSPQDSQLLSNMGSDEDFVVIELGGEDGGSLSPRPHERNLSGGGSLGQSRSHSARKMEQKIGHLKSRKWHHVSIMGDECIDTRKKDEQFCIQPLRRSFSMDSANDRQVYLEVQAITQQSNRHQNEASGSEDSNSNSRGRRSFFPFRYGRGSKNAVLPLENEV 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0620 321 PANTHER RING-H2 FINGER PROTEIN ATL16 4 318 IPR044600 GO:0016567|GO:0016740
Acco06g0620 321 MobiDBLite consensus disorder prediction 183 211 - -
Acco06g0620 321 SMART ring_2 99 140 IPR001841 -
Acco06g0620 321 MobiDBLite consensus disorder prediction 277 299 - -
Acco06g0620 321 FunFam E3 ubiquitin-protein ligase ATL6 62 147 - -
Acco06g0620 321 CDD RING-H2_EL5-like 99 141 - -
Acco06g0620 321 MobiDBLite consensus disorder prediction 277 303 - -
Acco06g0620 321 ProSiteProfiles Zinc finger RING-type profile. 99 141 IPR001841 -
Acco06g0620 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 146 IPR013083 -
Acco06g0620 321 Pfam Ring finger domain 99 141 IPR001841 -
Acco06g0620 321 SUPERFAMILY RING/U-box 98 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0620 Acco-ChrAcco06 4005602 4006567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0620 2 281 C3H Transcription Factor Family AT1G04360 45.928 2.21e-77 239