Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0614 ATGACTGGCTCTGGATCTCCGTGTGGAGCCTGCAAATTCTTGAGGAGGAAATGTGTGAGAGGGTGTGTATTTGCACCATACTTCTGCCATGAGCATGGAGCTAGCCAATTTGCAGCGATTCATAAGGTGTTTGGTGCAAGCAATGTTTCCAAGCTCCTTGCTCACCTCCCCGTGAGTGACCGGAGTGAAGCTGCCGTCACCATCTCCTACGAAGCTCATGCTAGGCTTCAGGATCCTATCTATGGCTGTGTTTCTCATATCTTCGCCCTCCAGCAGCAGGTGGTCAATTTACAAGCACAGCTAGTTTATCTGAGGGAACAAGCAGCTCAATGCTTTCACACTGAAAACCCTAATGAAAAGTACTGTGGAAAACCTACTAGTGCAATTAATTTCCCTCACGATCTTCATGGTTGGTTCCAGAGCCAAAATTCCGACACGGCAGGGCCTCATCATGAGTTTCTCCCAAACATGTCTAATAATTATGGGAGCAGCAGCAGCAGCAATCCTTTGATGAATCTAAACCCTATGGGGAATAATAATGAAGAAAGCATGTCATTTTCTAGCTTTGATGAGACTGCTTCTAATAACTCCATGTCCCATGACGTCTTGCAAAACAGCAAGCACTGGGCCTTTCATGAAGTGGACGACCTTCAGTCGGTGGCTTTCGGTTTCTGCCGATCGGCTTCATGA 690 0.4696 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEHGASQFAAIHKVFGASNVSKLLAHLPVSDRSEAAVTISYEAHARLQDPIYGCVSHIFALQQQVVNLQAQLVYLREQAAQCFHTENPNEKYCGKPTSAINFPHDLHGWFQSQNSDTAGPHHEFLPNMSNNYGSSSSSNPLMNLNPMGNNNEESMSFSSFDETASNNSMSHDVLQNSKHWAFHEVDDLQSVAFGFCRSAS 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0614 229 Coils Coil 87 107 - -
Acco06g0614 229 MobiDBLite consensus disorder prediction 177 197 - -
Acco06g0614 229 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Acco06g0614 229 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Acco06g0614 229 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0614 Acco-ChrAcco06 3949519 3950297 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0614 7 128 AS2 family AT3G58190 75.781 9.33e-65 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Acco06g0614 LOB 3.5e-36 No_clan