Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0611 ATGGAATTCAGAAACCCAGAAGATTCCAGAAGCTCCAGCGACGAAAACGATGATACGACAGGGATTGGAAGATCCTACGAGTGCGTGTTTTGCAAGAGAGGCTTCACTACAGCACAAGCTTTGGGAGGACACATGAATATACACAGAAAGGATAGAGCCAAAACCAAGCCCAGTAATAATATTGGTCCTTCATCTTCAACCAAACTTGTGGATCTCGGTTTCTATTCTGCACGTACTGCTACTACTCCAGGAAATTACTACTTAACACCTACTCCTCCGGATGAGGTAGACAGTAATTACCCTCAATTTTATCATGCCAGTAGTACAATCAGATCTTCTTCTTCGCATGTACCAGATTGGAGGACCAGAAGCTTGAGCTTGTATACCAATCCTTTCTGCGTCGTACGCGACAAGATACAAGACGATATGTCAGAGGATGGCCTGGATTTGGAGCTTCGTCTGGGTTATCACCCATAG 477 0.4465 MEFRNPEDSRSSSDENDDTTGIGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSNNIGPSSSTKLVDLGFYSARTATTPGNYYLTPTPPDEVDSNYPQFYHASSTIRSSSSHVPDWRTRSLSLYTNPFCVVRDKIQDDMSEDGLDLELRLGYHP 158
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0611 158 ProSiteProfiles Zinc finger C2H2 type domain profile. 26 53 IPR013087 -
Acco06g0611 158 PANTHER OS07G0101800 PROTEIN 9 157 - -
Acco06g0611 158 Gene3D Classic Zinc Finger 10 72 - -
Acco06g0611 158 Pfam C2H2-type zinc finger 26 50 - -
Acco06g0611 158 SUPERFAMILY beta-beta-alpha zinc fingers 24 53 IPR036236 -
Acco06g0611 158 ProSitePatterns Zinc finger C2H2 type domain signature. 28 48 IPR013087 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Acco06g0611 Acco-ChrAcco06 3930234 3930710 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0611 24 158 C2H2 Transcription Factor Family AT4G17810 32.609 3.88e-15 67.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco06g0611 zf-C2H2_6 1.3e-05 CL0361