Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0610 ATGGAAGGAAACTATGCGAGAAGAGATCAGAAGCATGGAGAAGAAAACGTGAACTTTGAGGAGCAATATTCATGGGGAAGCTCATGGCCAGCAAGAAATTACTCATGTAGCTTCTGCAAGAGAGAGTTCAGGTCAGCTCAAGCTTTGGGAGGCCATATGAACGTGCACAGGAGAGATAGGGCTAGACTCAGATCAGGCATAATACCACCCTTTTGGCTTCATAATTCTGATTCATCTCTTAAACCTAACCCTATAACCTCAAGGCCACCTTCTAATAACCCAACTTCCTTTTCTGCTCATGCTCCTTCTCTCACTTTGTCTTCTTCTGCGAGTGATGATAATAATAAGAAACCACCAATGCTCGTCACGTCGTCTTCTTCCAAGCTCCCTCTTCTGAGCCCTCAGAGCAGAGAAATGATCATGAATGGTGGCAACACGAGGAGTGGAATTAGATCAGTTAACGAGGAATTGAAGAAGGGGTGTGCAAAGGAGAAAGGGCTTGAAGGTTTCGAGGACATTAAGGAGGATAATATAACGTTGGACCTGGGTTTAGGGTTGCTTCAACACCCAAAGGAGCAAATAGATTTGGAGCTTCGACTCGGGCATTTCTAG 612 0.4493 MEGNYARRDQKHGEENVNFEEQYSWGSSWPARNYSCSFCKREFRSAQALGGHMNVHRRDRARLRSGIIPPFWLHNSDSSLKPNPITSRPPSNNPTSFSAHAPSLTLSSSASDDNNKKPPMLVTSSSSKLPLLSPQSREMIMNGGNTRSGIRSVNEELKKGCAKEKGLEGFEDIKEDNITLDLGLGLLQHPKEQIDLELRLGHF 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0610 203 SMART c2h2final6 34 56 IPR013087 -
Acco06g0610 203 MobiDBLite consensus disorder prediction 78 149 - -
Acco06g0610 203 Pfam C2H2-type zinc finger 34 58 - -
Acco06g0610 203 Gene3D Classic Zinc Finger 18 66 - -
Acco06g0610 203 PANTHER OS07G0101800 PROTEIN 9 202 - -
Acco06g0610 203 SUPERFAMILY beta-beta-alpha zinc fingers 31 60 IPR036236 -
Acco06g0610 203 ProSiteProfiles Zinc finger C2H2 type domain profile. 34 61 IPR013087 -
Acco06g0610 203 ProSitePatterns Zinc finger C2H2 type domain signature. 36 56 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0610 Acco-ChrAcco06 3922331 3922942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0610 3 203 C2H2 Transcription Factor Family AT2G42410 33.333 2.18e-23 92.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco06g0610 zf-C2H2_6 1.2e-06 CL0361