Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco06g0609 | ATGGAGCTGTGGCGTGCTAGAGGGAAACATAATGTGCTGCATGATAAAGAGTCTATTTGTGCTAAAAGCAAATATCGATTATTTGTTTTAGGCATTCAGCGTGACATTGATATGATTATTCGTGTCAAGATAGTCATCTCCATAGAGGATGTTCAGGGTATTTCGGAAAACATAGTTGTTGGTTCTCACATTTGGGTTGGTGATCCAGAAAAAGTTTGGATTGATGGAGAAGTATTGAAAATCAATGGAGAGGAAGTTGAGGTTCAAACTAGTTCTGGGAATACGGTTGTTGCCAGTTTGTCAAAATTACATCCCAAGGATGCGGATGCTCCTGCTGATGGAGTTGATGATATGACCAAGCTTGCTTATTTGCATGAGCCAGGAGTGCTACATAATTTAGCAACTAGATACAAGATGAATGAGATATATACTTACACTGGAAATATTCTTATTGCTGTCAATCCCTTTCAAAGTCTTCTGCACTTGTATGACGCTGATGTGATGCAAAAGTACAAGCGAGCAATGGTTGGAGGTTTAAGCCCTCATGTATTTGCTATTGCTGACGCTGCATACAGGGCAATGGTCAATGAGGGGAAAAGCAATGCTATTCTTGTCAGTGGTGAGAGTGGAGCTGGTAAGACAGAAACCACGAAAATGATCATGCGTTATCTGGCATATTTGGGTGGATATGCTGCAACTGAAGGAAGTAGTGTTGAGCAACAAGTTTTACAATCAAACCCAGTTCTTGAAGCATTTGGCAATGCAAAAACTGTCAGAAATAACAATTCCAGTCGTTTTGGAAAATTTGTTGAGATTCAATTCAATAAGCATGGCAAGATATCTGGCACAGCCATTAGAACATATCTCCTAGAGAAATCTCGTGTTTGCCAAATCTCTGATCCCGAGCGTAACTATCACTGTTTTTACCTTCTCTGTGCAGCTCCGCCTGAGGAAAAGCAGAGATATAAGTTGGGAGATCCTAAATCATTTCACTACCTTAATCAATCCAGTTGCTATGAATTAGATGGTGTTAATGATGCCCAGGAGTACTTGAGCACGAAGAGAGCCATGGATGTAGTGGGAATCAGTATTGAAGAACAGGATGCAATTTTCAGAGTTGTGGCTGCTATTCTTCATCTTGGTAACATTAAGTTTGAAAAATCAGAAGAAGACTCGTCAGTTTTAGCGGATGAAGAATCAAAGTTCCATCTCGAAATGACAGCAGAACTTCTCAAGTGTGTTCCAAGTGCTTTGGAAGATGCACTTTGTAAGCGTATGATGATTACCCCAGAGGAAGTCATTGAGAGAAGTCTTGATCCTCTTGCTGCGACAGTTAGCAGGGATGGTTTAGCCAAGACATTATATTCTCGGTTATTTGACTGGTTAGTCCAAAAAATAAATGTCTCCATTGGGCAGGATCCCAGCTCAAAAGGTATCATTGGAGTTCTTGACATATATGGCTTTGAAAGTTTTCAAACTAATCGTTTTGAGCAGTTTTGTATTAATTACACAAATGAAAAGCTGCAGCAACACTTCAACCAGCATGTGTTTAAGATGGAGCAAGAGGAATATACAAGAGAAGGAATTGGTTGGAGCTACTTAGAATTTGTAGATAATCAAGATGTATTGGATCTTATTGAAAAGAAACCAGGTGGACTCATTGCTCTGCTTGATGAGGCATGTATGTTTCCAAAGTCAACTCATGAAACATTTTCGCAAAAGCTTTATCAGACTTTCAAAAATAACAAGCGCTTCATCAAGCCAAAATTATCTCAATCAGATTTTACCATTGTTCATTATGCAGGGGAGGTTCAGTATCAGTCTGAACAGTTTTTAGACAAAAACAAAGACTATGTTGTTCCTGAGCATCAAGACATGCTGAGTTCTTCCAAATGTTTTTTTGTAGCAGGCCTTTTCCCCCCAATTTCTGAGGAGACAGCCAAATCTGCTAAATTTTCTTCTATCGGTGCCCACTTTAAGCTACAATTACAACAACTGATGGATACGCTGAAATCCACAGAGCCATACTATATTAGATGTGTGAAGCCAAATGATGAATTAAAACCTGCTGTGTTTGATAATATGAGTGTCATCCAACAACTTCGCTCTGGTGGTGTTCTTGAAGCGGTAAGAATTAAATGTGCTGGATTTCCAACACACAGGACCTTTCGTGATTTGTTGACTCGATTGGCTCTTTTTGCTCCAGAGATTGTCAATGAGAAGTATGTGTGCCTTGACTCAGATTCTGACATTTACTTGGTTTCTGGACTTGAAAACAATCCTCCTCTAAGCAGCTCTGATGAGAAAGATTCGTGTATAAAGATTTTGCAGAAGATTGGCCTTACAGGTTATCAGATAGGGGAATCACAGATATTCTTGAGAGCTGGTCAGATGGCTGAGTTAGACGCTCGAAGGGCACTCCTCCTTAGCAACTCTGCTATTGTTATCCAGAAACGGATCAAAACTCATCTGGCTCAGAAAAAATACGTAACATTGCAAAATTCTTCTGTCTGTGTGCAATCTTTTTGTAGAGGAGAAATGGCTCGGAGAACATATTATCACATGAAGAGAAATGCGGCAGCAGTCAGAATTCAAAGGAATATTTGTGGAAAACTAGCAAGGAAAAAATACAACCAAATATATACTTCTGCCATTATATTGCAGACAGGCTTACGGTCTATGGCAGCTCATGATGAATTGAGAAATAGACTGGAAACTAGCGCATCCATTAAACTTCAGGTTGCAGAGAAAGCAGTTGAAATGGAAAGCCAGGTTGTGGAGAAAGTAGTGGTAAATGAAAGCCCTTATGTGAAAGAATCCACAAAACATTGTAAACATACTGAAAGCATTCATGCCATCAAGGAATCCTCAAGTCCTCTCCAAGACCCTGAAAAGATTGAGGCTCTTACTTCAGAAGTCAAAAATTTAAAGGTTATGTTGCATGCAGAAAAACAAAGAGCAGATGATTGTGAAAGGAAATATGAGGAAGCCCAAGAATCTAGAGAGGAGTTACAGAAAAAGCTAGCAGAAGCAGAAGAAAGAGTATATCAGCTTCAAGACTCATTGGACAGGATGATATCTTCCATTTCAAGCCAAGTTGCGGGACTGAATGTGATATTAAGTACTTCATCAAGATTAAGTTCAACTTTTCGGCCTATTGCTAGAGTTGATGTTGCTTCCAGCAACTCCGATACTACATCCACAGATTCTGATTTCACAGCTTCGGCTCCTGCTTCAAATACAACCATTCAGCTTAACACCCAGCCTTGTCCTATTCAGCTAGCTGTTCAGGGTGTCACTGTAGCGGATGATTCAGGATCTGAAGGTGAAAAGGAGGGAACATTCGATGATTGCTTCTAG | 3360 | 0.3988 | MELWRARGKHNVLHDKESICAKSKYRLFVLGIQRDIDMIIRVKIVISIEDVQGISENIVVGSHIWVGDPEKVWIDGEVLKINGEEVEVQTSSGNTVVASLSKLHPKDADAPADGVDDMTKLAYLHEPGVLHNLATRYKMNEIYTYTGNILIAVNPFQSLLHLYDADVMQKYKRAMVGGLSPHVFAIADAAYRAMVNEGKSNAILVSGESGAGKTETTKMIMRYLAYLGGYAATEGSSVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVEIQFNKHGKISGTAIRTYLLEKSRVCQISDPERNYHCFYLLCAAPPEEKQRYKLGDPKSFHYLNQSSCYELDGVNDAQEYLSTKRAMDVVGISIEEQDAIFRVVAAILHLGNIKFEKSEEDSSVLADEESKFHLEMTAELLKCVPSALEDALCKRMMITPEEVIERSLDPLAATVSRDGLAKTLYSRLFDWLVQKINVSIGQDPSSKGIIGVLDIYGFESFQTNRFEQFCINYTNEKLQQHFNQHVFKMEQEEYTREGIGWSYLEFVDNQDVLDLIEKKPGGLIALLDEACMFPKSTHETFSQKLYQTFKNNKRFIKPKLSQSDFTIVHYAGEVQYQSEQFLDKNKDYVVPEHQDMLSSSKCFFVAGLFPPISEETAKSAKFSSIGAHFKLQLQQLMDTLKSTEPYYIRCVKPNDELKPAVFDNMSVIQQLRSGGVLEAVRIKCAGFPTHRTFRDLLTRLALFAPEIVNEKYVCLDSDSDIYLVSGLENNPPLSSSDEKDSCIKILQKIGLTGYQIGESQIFLRAGQMAELDARRALLLSNSAIVIQKRIKTHLAQKKYVTLQNSSVCVQSFCRGEMARRTYYHMKRNAAAVRIQRNICGKLARKKYNQIYTSAIILQTGLRSMAAHDELRNRLETSASIKLQVAEKAVEMESQVVEKVVVNESPYVKESTKHCKHTESIHAIKESSSPLQDPEKIEALTSEVKNLKVMLHAEKQRADDCERKYEEAQESREELQKKLAEAEERVYQLQDSLDRMISSISSQVAGLNVILSTSSRLSSTFRPIARVDVASSNSDTTSTDSDFTASAPASNTTIQLNTQPCPIQLAVQGVTVADDSGSEGEKEGTFDDCF | 1119 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco06g0609 | 1119 | Pfam | Myosin head (motor domain) | 115 | 794 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | Coils | Coil | 966 | 1028 | - | - | |
| Acco06g0609 | 1119 | Gene3D | - | 716 | 807 | - | - | |
| Acco06g0609 | 1119 | FunFam | Myosin heavy chain | 303 | 358 | - | - | |
| Acco06g0609 | 1119 | Gene3D | - | 489 | 673 | - | - | |
| Acco06g0609 | 1119 | CDD | MYSc_Myo11 | 127 | 794 | IPR036018 | - | |
| Acco06g0609 | 1119 | Gene3D | Myosin VI head, motor domain, U50 subdomain | 363 | 651 | - | - | |
| Acco06g0609 | 1119 | ProSiteProfiles | IQ motif profile. | 857 | 883 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | PRINTS | Myosin heavy chain signature | 532 | 560 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | PRINTS | Myosin heavy chain signature | 479 | 507 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | PRINTS | Myosin heavy chain signature | 200 | 225 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | PRINTS | Myosin heavy chain signature | 247 | 274 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | PRINTS | Myosin heavy chain signature | 143 | 162 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | SMART | MYSc_2a | 107 | 807 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | ProSiteProfiles | IQ motif profile. | 832 | 861 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | Pfam | Myosin N-terminal SH3-like domain | 61 | 99 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | ProSiteProfiles | Myosin N-terminal SH3-like domain profile. | 59 | 108 | IPR004009 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | Gene3D | Kinesin motor domain | 116 | 712 | IPR036961 | - | |
| Acco06g0609 | 1119 | SMART | iq_5 | 831 | 853 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | SMART | iq_5 | 856 | 878 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | SMART | iq_5 | 808 | 830 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 86 | 858 | IPR027417 | - | |
| Acco06g0609 | 1119 | Gene3D | - | 809 | 858 | - | - | |
| Acco06g0609 | 1119 | Gene3D | - | 859 | 910 | - | - | |
| Acco06g0609 | 1119 | PANTHER | MYOSIN | 105 | 1048 | - | - | |
| Acco06g0609 | 1119 | ProSiteProfiles | Myosin motor domain profile. | 113 | 806 | IPR001609 | GO:0003774|GO:0005524|GO:0016459 | |
| Acco06g0609 | 1119 | Gene3D | - | 303 | 361 | - | - | |
| Acco06g0609 | 1119 | FunFam | Class V myosin | 489 | 631 | - | - | |
| Acco06g0609 | 1119 | Pfam | IQ calmodulin-binding motif | 811 | 829 | IPR000048 | GO:0005515 | |
| Acco06g0609 | 1119 | Pfam | IQ calmodulin-binding motif | 835 | 852 | IPR000048 | GO:0005515 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco06g0609 | Acco-ChrAcco06 | 3904497 | 3917923 | Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco06g0609 | 53 | 1010 | Myosins gene family | AT1G08730 | 63.711 | 0.0 | 1282 |