Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0607 ATGGCTGATAAATTATGCCTGAACGAAGAAGAAAAGGCTATGTTTGAATCTGTGTTGGGTGCGGCAGCCACTGCGTTCTTTGTTTCGGCCGTTTCCAATAATGTTTTCTCCGACGTCATTGTTCCATCTGGAGGTGACTTGGGTCTCCATCCCAGGTTGTCCCAGATTGTTGAAGTGTCGAAATGCACCTACGCCATCTTTTGGCGGGTGGTGGGCTTGAAATCTGGTGGCTCTGCTTTGGTTTGGGGTGATGGATTTTGTCGGGATTCTAAAGGAGGTGATCTGAATGGAGCTGCCAAAGAGAAGGAGAAGGTGAAAGGCCGAGTGTTGCAGAAGCTTCGCGCCTGCTTTGGTGGGCCAAAAGAGTCTGATTCTGCGAGATTGGATAGGATCTCCGACATGGATATGTTTTACTCAACCTCAATGTATTATATATTTGGTTTTGATTCCCGGTATGGCCCTGGAAGTTCATTCAAGTCTAGTAAATCAATTTGGGCATGGGACTTTTCTCATTGTCTGAACCAATATGAATCGAGATCGTTTCTGGCAAACTTGGCTGGTTTTCAAACGGTTGCTTTTATACCTCTCAAGTCTGGGGTTGTTGAGCTTGGTTCAAAGGAAGTGATGCCTGAAGATTTTAATATTTTGGAGATGGTCAGAACAACCTTTGGAGAGCCTAATTCTGGACAGGCAAAGGTGTATCCCAAGATTTTTGGGCGTGAGCTAAGCCTTGGGGACGCAAAATCTCAGTCCATAACCATCAGTTTCTCCCCCAAGGTAGAAGATGATTCTGGTTTCACTTCAGACTCTTGTGAGGTACAAGCACTGGGGACTAACCATGTGTTTGGGAATTCTTCCAATGGGAGCATAGCTGATAGCAACGAAGCAAAACTGTTCCCACAACTGAATCAAATGATTGGCGGGAATTTCAATGCTCAAGCAAGGGTTTCTTGTCTGGACCTTGGTAATGAAGACTTGTCGCAGCACCCAGATGAGCGGAAGCCCAGAAAAAGAGGGAGGAAACCTGCCAATGGTAGAGAGGAACCCCTAAATCACGTTGAAGCAGAGAGACAGAGAAGGGAGAAACTTAACCAGAGGTTTTATGCCTTAAGATCTGTTGTTCCTAACATATCCAAAATGGACAAGGCGTCTCTGCTTGGTGATGCCATTACCTATATAACTGATCTGCAGATGAAGATCAAGGTGTTGGAAGCTGAGAAGGGTTTGATGAACAACAAAGACATGCAGTTGCCATTGCCAGATATTGATTTTCAGGCCAGAAGGGATGATGCGGTTCTGAGCATGAGCTGTCCATTGGATACCCATCCTGTTTCTGGGGTTGTTAAGACTTTGAGGGAGCATCAAATTATACCTCAAGAGTCCATTGTTTCAACTGCTGACGATAAGGTCATTCACACGTTCTCCATAAAAACTCATGGTGGGGAGAGTGCTGCTGTACAGTTGAAGGAGAAGCTCGAAGCCTCCCTAATCAAAGGCTGA 1500 0.4553 MADKLCLNEEEKAMFESVLGAAATAFFVSAVSNNVFSDVIVPSGGDLGLHPRLSQIVEVSKCTYAIFWRVVGLKSGGSALVWGDGFCRDSKGGDLNGAAKEKEKVKGRVLQKLRACFGGPKESDSARLDRISDMDMFYSTSMYYIFGFDSRYGPGSSFKSSKSIWAWDFSHCLNQYESRSFLANLAGFQTVAFIPLKSGVVELGSKEVMPEDFNILEMVRTTFGEPNSGQAKVYPKIFGRELSLGDAKSQSITISFSPKVEDDSGFTSDSCEVQALGTNHVFGNSSNGSIADSNEAKLFPQLNQMIGGNFNAQARVSCLDLGNEDLSQHPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQRFYALRSVVPNISKMDKASLLGDAITYITDLQMKIKVLEAEKGLMNNKDMQLPLPDIDFQARRDDAVLSMSCPLDTHPVSGVVKTLREHQIIPQESIVSTADDKVIHTFSIKTHGGESAAVQLKEKLEASLIKG 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0607 499 CDD bHLH_AtAIB_like 344 419 - -
Acco06g0607 499 MobiDBLite consensus disorder prediction 323 358 - -
Acco06g0607 499 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 350 417 IPR036638 GO:0046983
Acco06g0607 499 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 347 396 IPR011598 GO:0046983
Acco06g0607 499 Coils Coil 393 413 - -
Acco06g0607 499 Pfam Helix-loop-helix DNA-binding domain 351 397 IPR011598 GO:0046983
Acco06g0607 499 MobiDBLite consensus disorder prediction 325 358 - -
Acco06g0607 499 FunFam Transcription factor bHLH13 340 414 - -
Acco06g0607 499 PANTHER MYC 43 495 IPR045084 GO:0003700|GO:0006355
Acco06g0607 499 SMART finulus 353 402 IPR011598 GO:0046983
Acco06g0607 499 Gene3D - 340 413 IPR036638 GO:0046983
Acco06g0607 499 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 223 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0607 Acco-ChrAcco06 3869008 3870507 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0607 1 496 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.913 8.93e-154 444
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g0607 bHLH-MYC_N 6.7e-36 CL0161