Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0598 ATGGCAACGGAAGAGCCCGCTGTAGTTGTGGAGTCTGTACCGGAGCCAGTTGTTACCGAGCCTGCCGAGGAGAAAGAGGCAGCTGATGCTGGTGGCAAGACCAAGAAAGTTAAGGAGCCAAAGCCTAAGAAGGCTGCCGCTCCTAGATCTCGGAACCCTCCTGCGCATCCTCCCTATGAAGAGATGATTAAGGACGCAATTATTACGCTGAAGGAGAGAACTGGTTCCAGCCAATACGCGATTACCAAGTTTATCGAAGAGAAGTACAAGCAGCTTCCGTCCAACTTTAAGAAGATTGTGTTACTCCAATTAAAGAAGCTTGTGGCTTCCGGAAAGCTTGTTAAGGTCAAGGGCTCGTTCAAGCTTCCCGCTGTTAGGCCATCGGCACCGAAGGCATCGGGGAATTCTGCTGCGGCCAAGAAGCCTGCAGTTGCTAAGCCTAAGGCTAAACCTGTTGCTAAGCCTAAGGAGACGAAATCAGTCAAGGCGGCAACTAAAGCGCGTCCCAAGCCTAAGGCAGTAGCCAAGGCAAAGCCTAAAGCGGCTGCCAAGCCGAAGGCTGCTGCCAAGCCCAAAGCTGCTCCCGCGAAGGCCAAGGCTGCTCCGGCGAAGCCTAAGGCTATTGCCTCGAAACCAAAAGCTGCTGCCAAGCCCAAAGCAGCCGGAAGACCAAAGCCCAAAGAGAGACCAGCCAAGGCGTCGAGGACATCGACCAGGACATCCCCGGGCAAGAAGGCACCGGCTCCTAAACCGGCACCAAAGAAGGCTGCAGCAGCAACCAAGAAGGCTCCTGCTAAAGGCGTCAAGCCTAAGAGTGTGAAGTCTCCGGCAAAGAAGGCTACGACAAAGAGAGGAAGGAAGTGA 864 0.5417 MATEEPAVVVESVPEPVVTEPAEEKEAADAGGKTKKVKEPKPKKAAAPRSRNPPAHPPYEEMIKDAIITLKERTGSSQYAITKFIEEKYKQLPSNFKKIVLLQLKKLVASGKLVKVKGSFKLPAVRPSAPKASGNSAAAKKPAVAKPKAKPVAKPKETKSVKAATKARPKPKAVAKAKPKAAAKPKAAAKPKAAPAKAKAAPAKPKAIASKPKAAAKPKAAGRPKPKERPAKASRTSTRTSPGKKAPAPKPAPKKAAAATKKAPAKGVKPKSVKSPAKKATTKRGRK 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0598 287 MobiDBLite consensus disorder prediction 150 164 - -
Acco06g0598 287 MobiDBLite consensus disorder prediction 121 287 - -
Acco06g0598 287 MobiDBLite consensus disorder prediction 272 287 - -
Acco06g0598 287 CDD H15 53 132 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco06g0598 287 PRINTS Histone H5 signature 150 164 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco06g0598 287 PRINTS Histone H5 signature 180 197 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco06g0598 287 PRINTS Histone H5 signature 69 86 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco06g0598 287 PRINTS Histone H5 signature 42 63 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco06g0598 287 PRINTS Histone H5 signature 202 221 IPR005819 GO:0000786|GO:0003677|GO:0006334|GO:0030527
Acco06g0598 287 Gene3D - 50 152 IPR036388 -
Acco06g0598 287 PANTHER HISTONE H1 26 263 - -
Acco06g0598 287 Pfam linker histone H1 and H5 family 56 122 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco06g0598 287 MobiDBLite consensus disorder prediction 18 46 - -
Acco06g0598 287 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 55 124 IPR005818 GO:0000786|GO:0003677|GO:0006334
Acco06g0598 287 SUPERFAMILY "Winged helix" DNA-binding domain 52 132 IPR036390 -
Acco06g0598 287 FunFam Histone H1 50 135 - -
Acco06g0598 287 MobiDBLite consensus disorder prediction 165 185 - -
Acco06g0598 287 MobiDBLite consensus disorder prediction 1 62 - -
Acco06g0598 287 SMART h15plus2 53 119 IPR005818 GO:0000786|GO:0003677|GO:0006334
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0598 Acco-ChrAcco06 3796334 3797295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0598 50 127 Single Myb Histone (SMH) Gene Family AT1G49950 39.506 1.03e-07 50.4