Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0597 ATGGCGGATGCTGGAGGAGATATTGCACCTGGGCAGCCGAAGAAGAGGACATTCAAGAAGTTCAGTTTCAGAGGAGTTGATCTGGATGCGCTCCTGGACATGTCTACTGATGAGCTCGTCAAACTCTTCCATGCTCGGCCACGCAGAAGGTTCCAGCGCGGTCTGAAGCGAAAACCAATGGCACTGATCAAGAAGCTGCGTAAAGCGAAGCGGGAAGCCCCACCTGGTGAAAAGCCGGAACCAGTAAGGACTCACCTCCGGAACATGATCATTGTACCTGAGATGATTGGTAGCATTATTGGTGTTTACAACGGCAAGACCTTCAATCAAGTTGAAATCAAACCAGAAATGATTGGTCACTATCTAGCCGAGTTCTCAATCTCTTACAAGCCTGTTAAGCATGGCCGGCCCGGTATTGGTGCTACTCACTCTTCTAGGTTCATTCCTCTCAAGTGA 456 0.4934 MADAGGDIAPGQPKKRTFKKFSFRGVDLDALLDMSTDELVKLFHARPRRRFQRGLKRKPMALIKKLRKAKREAPPGEKPEPVRTHLRNMIIVPEMIGSIIGVYNGKTFNQVEIKPEMIGHYLAEFSISYKPVKHGRPGIGATHSSRFIPLK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0597 151 Hamap 30S ribosomal protein S19 [rpsS]. 47 140 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 PIRSF RPS19p_RPS19a_RPS15e_RPS19o 9 151 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 PRINTS Ribosomal protein S19 family signature 116 131 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 PRINTS Ribosomal protein S19 family signature 84 103 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 PRINTS Ribosomal protein S19 family signature 104 116 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 SUPERFAMILY Ribosomal protein S19 55 135 IPR023575 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 PANTHER RIBOSOMAL PROTEIN S19P FAMILY MEMBER 11 151 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 Pfam Ribosomal protein S19 49 134 IPR002222 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 Gene3D 30s Ribosomal Protein S19; Chain A 9 151 IPR023575 GO:0003735|GO:0005840|GO:0006412
Acco06g0597 151 ProSitePatterns Ribosomal protein S19 signature. 104 128 IPR020934 GO:0003723
Acco06g0597 151 FunFam 40S ribosomal protein S15 9 151 - -
Acco06g0597 151 NCBIfam 30S ribosomal protein S19 18 151 IPR005713 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0597 Acco-ChrAcco06 3786364 3788296 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0597 9 151 Cytoplasmic Ribosomal Protein Gene Family AT5G09500 88.811 3.67e-89 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0597 06 3786364 3788296 Acco06g0597 06 3786364 3788296 ECH