Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0586 ATGGAGAGTCCAACAATATCAATGGGTGAGCTGAACCTAAAGGACACAGAGCTAAGGCTTGGATTGCCAGGCAGCGATGTGCCAGAGAAACGTTGCAATGTTGGAAGCAAAAGGAAATGTTCGCCTGAGGAGGAATCAACAGGCAATAGAAATGACGCTAAAAGTGATCATAACCAGTCAGACAATAATGGCCCACAAGCAAAGGTACAAGTAGTGGGGTGGCCACCGGTGAGAAGTTTCAGGAGGAACAGTGTTCAACAGAAGAAGGAGGAAGAGGGTGGGAGGTACGTGAAAGTGAGCATGGCTGGTGCAGCTTACTTGAGGAAGATAGATTTGAAGGTTTATAAGAGCTACCCACAAGTCTTAAAGGCCTTGGAAAACATGTTCAAGTGCACTTTCGGAGAATATTCAGAGAGGGAGGGATACAATGGATCTGAGTATGTTCCCACGTATGAAGACAAAGAGGGAGACTGGATGCTTGTTGGAGATGTTCCATGGGACATGTTCATATGCTCCTGCAAGAGGCTCAGAATCATCAAAGCATCTGAAGCTAAGGGTTTGGGTTGTCTATGA 573 0.4607 MESPTISMGELNLKDTELRLGLPGSDVPEKRCNVGSKRKCSPEEESTGNRNDAKSDHNQSDNNGPQAKVQVVGWPPVRSFRRNSVQQKKEEEGGRYVKVSMAGAAYLRKIDLKVYKSYPQVLKALENMFKCTFGEYSEREGYNGSEYVPTYEDKEGDWMLVGDVPWDMFICSCKRLRIIKASEAKGLGCL 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0586 190 MobiDBLite consensus disorder prediction 31 57 - -
Acco06g0586 190 FunFam Auxin-responsive protein 89 190 - -
Acco06g0586 190 SUPERFAMILY CAD & PB1 domains 91 179 - -
Acco06g0586 190 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 10 185 IPR003311 GO:0005634|GO:0006355
Acco06g0586 190 Pfam AUX/IAA family 34 188 IPR033389 -
Acco06g0586 190 MobiDBLite consensus disorder prediction 1 73 - -
Acco06g0586 190 ProSiteProfiles PB1 domain profile. 94 186 IPR000270 GO:0005515
Acco06g0586 190 Gene3D - 88 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0586 Acco-ChrAcco06 3708861 3709550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0586 83 187 B3 DNA Binding Superfamily AT2G46530 36.792 2.89e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Acco06g0586 AUX_IAA 1.1e-53 CL0072