Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0564 ATGGTTCACGATCTCGCACTTTGGCAGCTGCTCGCTTTAGGGTTTCTGATTTCCTTCATAATTCCGGTCTCACACGGGGAATCGTCTACCTGTTTGACTGTCTACAAGAATGGTGGTGCTCCGGCGGTTTTTCAATCCCCGAAATGCCCCCGTTGGAATCTCTTCGATTACGGCTCCCGTTCCCAAATCCCGGCGCGTTGTCAGCATGCGATGCTTCAGGGCCGAAGAAAATCTCAGGAAGACCGCACTCTCTGCGTCCTTGATGTTCGGATTCCCTTCCCCGGTAAAATGGGAATTAAGGAGGTTATGGTTGGAATTGTAGCAGTTTTTGATGGTCACAATGGCGCAGAAGCTAGTGAGATGGCATCCAAACTTTTGGTCGAGTATTTTGTGTTGCACACCTATTTTCTTTTGGATGCAGCATATTCATTTCTATTGAAGACATCGTCAGGAAGACTGCCTCATAAGAGAGATTATGATGAAGCAGGGCATCTACACAAGTGGGAAGAGATTCTTGGTCGTGATGAATTGCATTTTGGAAGGTTTGAGAATAAACTTTTGGCAAATTTTGATGATTCTTTTCACTTGGAAATTTTGAAGGAAGCATTGTTGAGAGCAATCCATGATATTGATGCAAAATTTTCTGAGGAAGCATCTAGAAGTAATCTTGATTCAGGCTCTACAGCAACCACTGTATTAATTGCAGATGATAAATTTTTGGTTGCCAATATTGGAGACTCTAAGGCCTTCTTGTGTTCTGAGAAGTTTCAGTCTCCCAGAGAGGCTAAAGCATCGTTATTAAAGTTATACAGGCAGAATGAGGGTCATAGTTCTGTTTCCCATGTCTGGGATCGTGAAAAGTATAAATTAGCTTCCTCATTTGGATTCACTCACTTTGCAGCTATGGAATTAACCAGTGACCATCATCCAGACAGAGAAGATGAAAGAATTCGGGTGGAAACAGCTGGTGGTCAAGTTACTGATTGGGGAGGTGTGCCTCGTATAAATGGTCAGCTAGCTATTACACGGGCTATTGGTGATGTGTCCTTCAAAAGTTATGGTGTTATATCAGTACCAGAGGTGACAGATTGGCAGCCTCTGACTGCCAATGATAGCTATTTGGTGGTTGCATCTGATGGTGTTTTTGAGAAGATGAGCTCACAGGATGTATGTGATATGTTGTGGGAAGTACATAGTTACGGTAACCCAAGATCTGGGTTTTCCCCATCATGCTCCTATTCACTGGCAGATTGTATTGTCAAGACTGCCTTGAAAAAGGGAAGTATGGATAATTTGGCAGCAGTTGTGGTTCCTTTGGAATCTGCTATTTTTTCTGATAACTCATTTGGAAGCTGTATTGAGAAGAGTGATGTAGATAGCCCGCTACTTGAACTGCAGGAATTTGCTTCCCGAAGCTCCGTTAATGGCATTACATCAGATCCAATGCAACTGGAGCATCTGCGACCAGTGGATACCGGGTTTGAGCGTATATTGGCTGAAGTGAAATATGGTGATGTTGGATGTTTTTATTTATCTGAAAACCTTGGTGAAGCTATGGACTATAAGCAGCCTGCTACAGAGACCAACTGGTTTAACTATTTATATAAACTACCAGAGCCTTTGCCTGACGGTCTTCATCAACATTCTGGTGGTCCTGTAAATTTGTACAACAACCAAAACTTTTGCTTTCACCTTGGCATGACCGTCAATGGAGCTAAAGAGCAATGCATAAATCCTGAATCCTTTGCTAGTTTTATTGGTCTGCTTGAATCAATTCCTTTACATGATACTGGTTCTGATAATGGGTCTTTTGATTCTTCATTCCCTGATATGAGGTATGTTTTGAAAAAGAGGTTTGGCCGTGGATCATATGGTGAAGTGTGGTTGGCCTTTCATTGGAACTGTAAAGTTGACAATGATCCAAAGTTAAGCAAGGATAACAATAATTTCTCTCTTAGCTTTATCAATGTTGATTCATACAATAGAAACAGCAGCTCAAGTACTCATGATTGCCAGAACGGTCCTTCTAACATCAACATGTACATTCTGAAACGGATAATGGTAGAGAGAGGAGCTGCTGTTTACTTGAGTGGTCTGAGGGAGAAGTATTTTGGAGAAGTTTTTTTGAATGCTTCCAGGTGCTTTGGAGATCCACTTCCAGCTGGAAACTCAAACTGTAACCCAAAAAAGGAACAATTCAGGTCTTATGACCAATCAAAAACCAATGATTCTGTGCTACATTACATAAGAAACTCTTGGGGTTCTGAGAATTTATTTACAAACAAATTCCAGTTGCCAAAGGCCATCCATGAAGAGGGTCTCAACCATATTGCAAGATATGTGGAATCTTTTGAATCTCGATCCAATGAATTGTGGCTTGTATTTCATTATGAAGGCATATCTTTGTCCAAACTCATGTATAGTGTGGAAGAAGCCTATGATACTGCTGACAGAGAAAGATCTGAGCAAGTAAAACATGTTCAGATATTACGTCCTTCAAAGTGGTGGCATTGGTTGAAGACAACGGAAGAAGGGCAACAGGAAATGCGTAACATTATATGGCAGCTGTTAATGGCACTGAAGTCATGTCATGATCGGAATATCACTCACAGAGATATCAAACCTGAGAATATGGTGATATGCTTTGAAGATCAGGAGACTGGAAGATGCTTAAAAGAGGTTCCAACAATTAATAGGACAATCTCTACCAAAATGCGTATTATTGACTTTGGCAGTGGAATTGATGGGTTTACATTGAAGAACTTGTACGGGTCTACTGGACCATCCCGAGCCGAACAAACTTATGAGTATATGCCTCCTGAAGCTTTGCTAAATGCTACTTGGTATCAAGGACACACAAGCTCTACTTTGAAATATGACATGTGGAGTGTTGGTGTTGTGATGTTGGAGTTGACCTTAGGAACGCCAAATGTTTTCCAGATAAGTTCTTTAACACGTACTCTTTTGGACCGACATCTTGAGGGCTGGAAAGAAGGCATAATGGAACTGGCTTACAAACTTAGATCGTTCATGGAATTGTGCATATTAATCCCTGGGATTTCTGGCAGTTCCTTCAAACAGTATCACACGGGAAACCAAGTTGGAGTCCCTCCCGCATCATGGAAATGCTCCGAGGATTTCTTTTCACGACAAATTAAAAGTCGGGATCCTCTTAAATTAGGGTTTTCAAACATCTGGGCTTTGCGGTTAGTGCGTCATCTATTGCTATGGGACCCAGAAGATCGATTGAGTGTTGACGAGGCGTTGCAGCACCCCTATTTTCATCCTCCCCCAAGTGGCTGA 3303 0.4184 MVHDLALWQLLALGFLISFIIPVSHGESSTCLTVYKNGGAPAVFQSPKCPRWNLFDYGSRSQIPARCQHAMLQGRRKSQEDRTLCVLDVRIPFPGKMGIKEVMVGIVAVFDGHNGAEASEMASKLLVEYFVLHTYFLLDAAYSFLLKTSSGRLPHKRDYDEAGHLHKWEEILGRDELHFGRFENKLLANFDDSFHLEILKEALLRAIHDIDAKFSEEASRSNLDSGSTATTVLIADDKFLVANIGDSKAFLCSEKFQSPREAKASLLKLYRQNEGHSSVSHVWDREKYKLASSFGFTHFAAMELTSDHHPDREDERIRVETAGGQVTDWGGVPRINGQLAITRAIGDVSFKSYGVISVPEVTDWQPLTANDSYLVVASDGVFEKMSSQDVCDMLWEVHSYGNPRSGFSPSCSYSLADCIVKTALKKGSMDNLAAVVVPLESAIFSDNSFGSCIEKSDVDSPLLELQEFASRSSVNGITSDPMQLEHLRPVDTGFERILAEVKYGDVGCFYLSENLGEAMDYKQPATETNWFNYLYKLPEPLPDGLHQHSGGPVNLYNNQNFCFHLGMTVNGAKEQCINPESFASFIGLLESIPLHDTGSDNGSFDSSFPDMRYVLKKRFGRGSYGEVWLAFHWNCKVDNDPKLSKDNNNFSLSFINVDSYNRNSSSSTHDCQNGPSNINMYILKRIMVERGAAVYLSGLREKYFGEVFLNASRCFGDPLPAGNSNCNPKKEQFRSYDQSKTNDSVLHYIRNSWGSENLFTNKFQLPKAIHEEGLNHIARYVESFESRSNELWLVFHYEGISLSKLMYSVEEAYDTADRERSEQVKHVQILRPSKWWHWLKTTEEGQQEMRNIIWQLLMALKSCHDRNITHRDIKPENMVICFEDQETGRCLKEVPTINRTISTKMRIIDFGSGIDGFTLKNLYGSTGPSRAEQTYEYMPPEALLNATWYQGHTSSTLKYDMWSVGVVMLELTLGTPNVFQISSLTRTLLDRHLEGWKEGIMELAYKLRSFMELCILIPGISGSSFKQYHTGNQVGVPPASWKCSEDFFSRQIKSRDPLKLGFSNIWALRLVRHLLLWDPEDRLSVDEALQHPYFHPPPSG 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0564 1100 Gene3D - 62 443 IPR036457 -
Acco06g0564 1100 FunFam uncharacterized protein LOC106771884 isoform X8 834 1095 - -
Acco06g0564 1100 Pfam Protein kinase domain 844 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0564 1100 PANTHER PROTEIN PHOSPHATASE 62 438 IPR015655 GO:0004722|GO:0006470
Acco06g0564 1100 CDD PP2Cc 73 439 IPR001932 -
Acco06g0564 1100 Gene3D Transferase(Phosphotransferase) domain 1 834 1095 - -
Acco06g0564 1100 ProSiteProfiles PPM-type phosphatase domain profile. 66 439 IPR001932 -
Acco06g0564 1100 ProSiteProfiles Protein kinase domain profile. 613 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0564 1100 ProSitePatterns Serine/Threonine protein kinases active-site signature. 868 880 IPR008271 GO:0004672|GO:0006468
Acco06g0564 1100 SMART PP2C_4 58 437 IPR001932 -
Acco06g0564 1100 SMART serkin_6 613 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g0564 1100 Pfam Protein phosphatase 2C 198 431 IPR001932 -
Acco06g0564 1100 SUPERFAMILY Protein kinase-like (PK-like) 612 1096 IPR011009 -
Acco06g0564 1100 SUPERFAMILY PP2C-like 64 440 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0564 Acco-ChrAcco06 3518635 3530643 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0564 768 1099 PP2C-type Phosphatase Gene Family AT3G63340 69.254 1.04e-164 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Acco06g0564 Pkinase 1e-25 CL0016