Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0560 ATGAACGTGGAGGGTGGACACGGCGGTGTAGCCGTACCACCGGCGAAGCCATTTCTCAAGTGGCTCAAGGGCTCCCTCAAGGAGACTTTCTTTCCTGATGACCCCTTCAGGCAGTTCCAGAACCAGCCTCCTTCAACCAGGTTCCTCCTCGCCCTTCAATACATCTTTCCTATCTTCCACTGGGCTCCTCGCTACTCTCTCCACTTCCTCAAATCTGACGTCATCGCCGGCATCACTATCGCCAGCCTGGCTATTCCTCAGGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCCATTCTTGGCCTCTATTCGAGCTTCATACCGCCATTGATTTATGCGATGATGGGAAGCTCCAGGGATTTGGCGGTGGGTACTGTTGCCGTTGGATCACTTCTCATGGCTTCCATGTTGGGCAGTGTTGTTAATCACAACCAGAACCCCAAGCTTTATCTTCACCTCGCCTTCACTGCTACTTTCTTCGCCGGCATTTTCCAGGCTGCTCTCGGCATCTTTAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAACAATAATAGGGTTCATGGGAGGAGCGGCGACGGTGGTATGCCTGCAACAGCTAAAATCCATTCTGGGGCTTCAGCATTTCACGCACGAAGCCGATCTCGTCTCCGTCATGCGATCCGTTTTTACCCAAACGCATGAGTGGAGGTGGGAAAGCGCCGTGTTAGGAAGCTGTTTCATTTCCTTCCTCCTCATCACCAGATTCCTCAGCAAAAAGAAACCAAAATTCTTTTGGGTGTCCGCAATGGCGCCGTTGACTTCCGTTATCTTTGGAAGCATTCTGGTTTACGTCACTCATGCGGAGAAACACGGCGTCCAAGTGATAGGAGACCTGAAGAAGGGGCTAAATCCCGGTTCCCTCACAAAGCTAGTATTTGTGGCGCCTTATATGAGCGCTGCTATTAAGACTGGTCTCATCACTGGCATCGTAGCTCTAGCGGAAGGAATAGCAGTAGGAAGAAGCTTTGCAATGTACAAGAATTACCATATTGATGGCAACAAAGAGATGATAGCTATTGGGTCCATGAACATAGTTGGTTCTTTCACCTCTTGCTACCTCACCACGGGGCCATTTTCACGTACAGCTGTGAACTATAATGCTGGATGCAAGACTGCAGCATCAAATATAGTAATGGCAATAGTGGTAATGTTGACGCTGTTATTCCTGACACCCTTGTTCTATTACACTCCCCTGGTGGTTCTATCAGCTATCATTGTCTCAGCAATGCTTGGACTTATAGACTATCAAGCAGCCATCCATCTCTATAAGATTGACAAAGGTGATTTTCTAGTGTGCATTAGTGCCTACATTGGCGTCGTTTTTTGCAGCGTTGAAATTGGCCTTGTCATAGCGGTTGCAATATCTGTACTTCGGGTAATTCTCTTTGTTGCAAGGCCAAGGACATCTGTTCTAGGCAACATTCCAAATACTGATGTATATAGAAATGTTGAACATTATCCAAATGCAATCCACGTTCCTGGGATTCTAATTCTTGAGATTGATGCACCCATATACTTTGCTAATGCAAGCTATTTGAGAGAGAGGATCACAAGGTGGATTGATGAAGAGGAAGACAGGATTAAAGGTACAGAGGAGACAAGCTTGCGGTATGTCATAATGGATATGGCTGCCGTTGGGAACATAGACACTAGTGGGATAAGCATGTTTGAAGAGATCAAGAAGATAGTAGATAGAAGAGGGCTACAACTTGTTCTGGTCAATCCTGGAGGCGAAGTGATGAAGAAACTGAACAAAGCCAAGTTCATAGAGGAAATAGGGCAGAAATGGATATATCTTACAGTAGAAGAGGCAGTTGAAGCATGCAGCCACATGCTTCACGCATGCAAAACCGACCCCACCAAGAATGAATCAGAGGGCTTGAACAATGTGTGA 1941 0.4704 MNVEGGHGGVAVPPAKPFLKWLKGSLKETFFPDDPFRQFQNQPPSTRFLLALQYIFPIFHWAPRYSLHFLKSDVIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLMASMLGSVVNHNQNPKLYLHLAFTATFFAGIFQAALGIFRLGFIVDFLSHATIIGFMGGAATVVCLQQLKSILGLQHFTHEADLVSVMRSVFTQTHEWRWESAVLGSCFISFLLITRFLSKKKPKFFWVSAMAPLTSVIFGSILVYVTHAEKHGVQVIGDLKKGLNPGSLTKLVFVAPYMSAAIKTGLITGIVALAEGIAVGRSFAMYKNYHIDGNKEMIAIGSMNIVGSFTSCYLTTGPFSRTAVNYNAGCKTAASNIVMAIVVMLTLLFLTPLFYYTPLVVLSAIIVSAMLGLIDYQAAIHLYKIDKGDFLVCISAYIGVVFCSVEIGLVIAVAISVLRVILFVARPRTSVLGNIPNTDVYRNVEHYPNAIHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKGTEETSLRYVIMDMAAVGNIDTSGISMFEEIKKIVDRRGLQLVLVNPGGEVMKKLNKAKFIEEIGQKWIYLTVEEAVEACSHMLHACKTDPTKNESEGLNNV 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0560 646 ProSitePatterns SLC26A transporters signature. 99 120 IPR018045 GO:0008271|GO:0008272
Acco06g0560 646 NCBIfam sulfate permease 57 620 IPR001902 GO:0016020|GO:0055085
Acco06g0560 646 Pfam STAS domain 502 620 IPR002645 -
Acco06g0560 646 PANTHER SULFATE TRANSPORTER 23 626 IPR001902 GO:0016020|GO:0055085
Acco06g0560 646 FunFam Sulfate transporter 31 481 627 - -
Acco06g0560 646 SUPERFAMILY SpoIIaa-like 503 624 IPR036513 -
Acco06g0560 646 Pfam Sulfate permease family 70 450 IPR011547 GO:0016020
Acco06g0560 646 Gene3D STAS domain 481 627 IPR036513 -
Acco06g0560 646 CDD STAS_SulP_like_sulfate_transporter 502 617 - -
Acco06g0560 646 ProSiteProfiles STAS domain profile. 501 624 IPR002645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0560 Acco-ChrAcco06 3492472 3498818 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0560 10 646 Inorganic Solute Cotransporters AT4G02700 67.241 0.0 889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g0560 06 3492472 3498818 Acco06g0560 06 3492472 3498818 ECH