Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0549 ATGAGGGAGGGGCTTAGATCTCGGGAGCGATTGGAGAAGCCGGAGACCGACGAGGTTTCTGGAAGTGGAGTATTTCAAAAGAAAGGAAGCATAGTAAAACAGGATGCTCCTGATTCTAGTGGTGTGGATTCTTCGAATGAGAGAGAGCCTTTGGACTTGGAAGTTGCGAATAAAGAAGTGGAGAAAGTAGCAAAAGAGTGTGAACTGGACTGTGATATGGTGACTGGGACGAACGTTGTGTTAGTCGAGAATGAGAACAATGGAAGGGTTTTAAATTGTGTGGATAACATTGAGGGGAAGGTGAAGAAGGAAGGGGACTCAAATGATAAATTGCAAATAGTTGGTCGAGTATTGCGCTCACAGTTGAAGAGGGCCGATGGTGAGAAATCTAATAATGAAGATAACGCTGTTGTGGAGGTGGTGAGGAAAAGTAGAGATTCTGATGGGTCTAAGAAGATACAGGTTAAGGCAGGAGAGGTAGAGACCCATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGCTTAAGGAAGGCACTGGCAAACGGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAGACAGAGATGACAATGCAGATACAGACCCATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGCTTAAGGAAGGCACTGGCAAATGGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAGACAGAGATGACAATGCAGATAGAGACCCATGAATGCGTTAGTAGTGGTTATGAGGAGAAGAAGCTTAAGGAAGCCACTGGCAGACGGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAGACAGAGATGACAGTGCAGGTAGAGACCCATGAATGCGTTAATAGTGGTTATGAGGAGAAGAAGATTAAGGAAGGCACTGGCAAACAGAAGTTGAAACGAAAGCGTGGGAGGCCCCCCAAAACAGAGATGACAATGCAGGTTGGTGGTTTTCCACGGAAGCCAGGGAGGCCACCCAAGGCTGGGCAAAATCATAAGCTCATCACTGTGGGATGTAGTAAAAATAGAAAGCTGGGCTTTCATAAAGGTAAAAAAGGTTTAACTATTAGAGAGGGTGCCTGTAGAAGTCCAACTAAACTATGCTCAAAGAGACCCTTTGGAAAGAAATTAGAAGTGAATTTTTCTTATATCAAACCTGAGAACAATGTAGGAGCATCACCATTGAGATCAAAGAAAAGGCAAAAGAGTAAAGCAAAGCAGTTGGTGAGGGACCAGATAATGGAACGGCTCACTGCTGCAGGCTGGACAGTTGACTATAGACTTAGGAATGGCAGAGATTACAGTGATGCAGTGTATGTTAGTCTAGACGGAAAGACCCACTGGTCAATTACCTTGGCCTACAATAGGCTGAAGATGCATTATGAAAATGGTGACGGTGAAGGCAAGGTGTATGGACCAGGTTTTAAATTCACACCTATACCTGAGGAAGAATTTAAAACATTAACTAAGGTGATCAGCAAGGAAAGAAAAGACAAAAAGAAATCAAAAAAGAAAGGGAAAAAGGATGGAGAAAAGGTTAATGGAGCTAACAAAAAGGAAAAAAAGGGGAAGAAGAAGAGTAAAGAGTCATTTATTGAGCAGGATCATTCTGATATTGCATCACCTAGCAGAATATCGATTCCGGTTAAGGATCATAAGCGACAGAAAACTCAAAACAAGAAGCGAGGTGTTCTGTTGGTTAGTGATGTCGAGAAAGAGGTAGATTCAGAAGTTGATGGATATGTTCCTTACAATGGAAAACGTACTCTACTTGCCTGGATGATTGATATGGGAATGGTCTTGCAAACTGGGAAGGTTCATTACATGAGCCATGGAAGTGAAGGAGTGGCATTGGAGGGCAGGGTAACAGGGGATGGCATTCACTGTGGCTGCTGTGATGAAATCATAACAATATCGGAGTTTGAAGCCCATGCAGGAAGCAAACTCTCCGATCCATTTAGAAATATATATACAGAGGGTGGAATTTCTCTCTTGCAGTGCCTGCTAGATTCGTGGAACAAACAAGATGAATCTGAACGTAAAGGTTTCCATTTCGTTGATGTTGCTGGTGAAGACCCTAATGATGATACGTGTGGCGTCTGTGGAGATGGCGGGGACCTGATATGTTGCGATAGTTGCCCATCAACATTCCATCAAAGCTGCGTGGGTATGAAAAAGTTTCCATTTGGTGATTGGCATTGCATTTATTGCTGTTGCAAATTTTGTGGTTTGGTCAGAAGTGCAAGCAAAAGGGATGGTGATGCTGATATTACTGAGTTCGCAACATTTACATGCCTCTTATGTGGACAACAATATCACAGATCCTGTATTGAGGTGGATTGTGCCCAGATTGATGATTCCTTTGATGCATTTTGTGGAAACAGATGTCAAGAGTTACATGAGAGACTCAATATGCTTCTTGGGATCAAACATGAAATTGAAGGAGGATTTGCCTGGACTTTAGTTCAGCGATCCGATGTTGGCTCAGATGCTTCTAAGATTAAATCTCAGATGGTTGAATGTAATTCCAAGCTAGCAGTTGCCGTATCGATAATGAATGAGTGTTTTAAGCCTTATATTGATCATAAAAGTGGGATTAATATGATCCACAGTGTTCTTTATAATTGTGGCTCAAACTTCAACCGCCTGAACTATAGTGGATTTTTTACTGCCATTCTAGAGAGGGGAGATGAAATTATCTGTGCTGCATCTATTAGGATCCATGGGAACCAACTAGCAGAGATGCCATTTATTGGGACCAGGTCTATGTATAGGCGGCAAGGAATGTGCCGTCGTCTCCTAAGTTCCGTTGAAGATGTACTCAGCTCTCTGAATGTAGGGTTATTGGTAATACCAGCTGTAGCAGAAGTCAGAGAAACTTGGACTTCAGTTTTTGCGTTTGAGCCACTTGATCCGACTAGCAAGCAAATGGTAAAAAACTTAAATCTGTTGGTGTTCCCTCATGTAGATATGTTACAGAAAAAGATACCAAAGCCTACTTCTGCTGAAGAAAATCTGACTCCTGCTGAAGATTCCAATCCTGAACTTCCTGACAGTATATGTCATGAGTTGGGCTGTTCTGGAACTGAAGTGATCGTTTCTGCTACAGATAAGCCATCAAGCCAAAACTCAGGGTCTAAGAAGGGAAGTCAATATCTCACAAAATCAGATGAGATAGTTACACATAGACACGGTGATGAGGATTCTCCGTGCCTCTTGTCAGAAAATATTCCTCACAGATCTGAGATTGTGTCTTGTCTGAGGGAATCCAAAGATTCTGAAATCGCATATGATAATTTGAAAAGTTTAACCCCGTTGGAAGATAATGATGGAACTTTGCATCCTGCGTCTCAGGAATTCCAGTTGGCTGATTCTGTTTTTGGTTCACATAAAATTTCCAGCAGTTGTGAACCGACAAGTGACCATGACTTTGTTCGGCATCATTCAGTGGAATCTAAAGAATTGCTTTCTGGGGATTTACCCGTTAATTGCATTAAACTGTCCAGTGTGGTCAGTGAGCTAAATGCTGATGAAGTTTGTGCATCCAAAACATCTAGTCTCCAGACTGACACAAATTCTGTAGATTGCCAATCCGTACAAGCGGCTTCAGGTTCTGCTGAGGATATTTTGAATGGCGTCAATGTTAACAGTGAATTATCTAGTGTAGCCGAGTTCAATTTGCTTCCAGCTGATAAGAAGTTAGTTCTCATTAATAACCGTTGGACGGGCCACTCTTCAGAGCTACCAGATCCTGGTTTACAAGTTGAGAGAACTGCGCAGTGCAATGGTTCTTCTCTGCGTAGCCCAAAAACTACTGGCCTGGCTCTTCACTGCGCGTCTGCTGGTGGCACTGAGGTGATAGTTCTGTCGAACAAAGCCAGTTGA 3900 0.4305 MREGLRSRERLEKPETDEVSGSGVFQKKGSIVKQDAPDSSGVDSSNEREPLDLEVANKEVEKVAKECELDCDMVTGTNVVLVENENNGRVLNCVDNIEGKVKKEGDSNDKLQIVGRVLRSQLKRADGEKSNNEDNAVVEVVRKSRDSDGSKKIQVKAGEVETHECVSSGYEEKKLKEGTGKRKLKRKRGRPPKTEMTMQIQTHECVSSGYEEKKLKEGTGKWKLKRKRGRPPKTEMTMQIETHECVSSGYEEKKLKEATGRRKLKRKRGRPPKTEMTVQVETHECVNSGYEEKKIKEGTGKQKLKRKRGRPPKTEMTMQVGGFPRKPGRPPKAGQNHKLITVGCSKNRKLGFHKGKKGLTIREGACRSPTKLCSKRPFGKKLEVNFSYIKPENNVGASPLRSKKRQKSKAKQLVRDQIMERLTAAGWTVDYRLRNGRDYSDAVYVSLDGKTHWSITLAYNRLKMHYENGDGEGKVYGPGFKFTPIPEEEFKTLTKVISKERKDKKKSKKKGKKDGEKVNGANKKEKKGKKKSKESFIEQDHSDIASPSRISIPVKDHKRQKTQNKKRGVLLVSDVEKEVDSEVDGYVPYNGKRTLLAWMIDMGMVLQTGKVHYMSHGSEGVALEGRVTGDGIHCGCCDEIITISEFEAHAGSKLSDPFRNIYTEGGISLLQCLLDSWNKQDESERKGFHFVDVAGEDPNDDTCGVCGDGGDLICCDSCPSTFHQSCVGMKKFPFGDWHCIYCCCKFCGLVRSASKRDGDADITEFATFTCLLCGQQYHRSCIEVDCAQIDDSFDAFCGNRCQELHERLNMLLGIKHEIEGGFAWTLVQRSDVGSDASKIKSQMVECNSKLAVAVSIMNECFKPYIDHKSGINMIHSVLYNCGSNFNRLNYSGFFTAILERGDEIICAASIRIHGNQLAEMPFIGTRSMYRRQGMCRRLLSSVEDVLSSLNVGLLVIPAVAEVRETWTSVFAFEPLDPTSKQMVKNLNLLVFPHVDMLQKKIPKPTSAEENLTPAEDSNPELPDSICHELGCSGTEVIVSATDKPSSQNSGSKKGSQYLTKSDEIVTHRHGDEDSPCLLSENIPHRSEIVSCLRESKDSEIAYDNLKSLTPLEDNDGTLHPASQEFQLADSVFGSHKISSSCEPTSDHDFVRHHSVESKELLSGDLPVNCIKLSSVVSELNADEVCASKTSSLQTDTNSVDCQSVQAASGSAEDILNGVNVNSELSSVAEFNLLPADKKLVLINNRWTGHSSELPDPGLQVERTAQCNGSSLRSPKTTGLALHCASAGGTEVIVLSNKAS 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0549 1299 MobiDBLite consensus disorder prediction 499 542 - -
Acco06g0549 1299 Pfam Tify domain binding domain 625 674 IPR032308 -
Acco06g0549 1299 MobiDBLite consensus disorder prediction 1 17 - -
Acco06g0549 1299 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 891 957 IPR016181 -
Acco06g0549 1299 PANTHER PHD FINGER PROTEIN 12 401 1128 IPR042163 GO:0003714|GO:0045892
Acco06g0549 1299 PRINTS AT-hook-like domain signature 185 195 IPR017956 GO:0003677
Acco06g0549 1299 PRINTS AT-hook-like domain signature 223 234 IPR017956 GO:0003677
Acco06g0549 1299 PRINTS AT-hook-like domain signature 263 273 IPR017956 GO:0003677
Acco06g0549 1299 MobiDBLite consensus disorder prediction 295 337 - -
Acco06g0549 1299 MobiDBLite consensus disorder prediction 174 196 - -
Acco06g0549 1299 ProSiteProfiles Zinc finger PHD-type profile. 700 745 IPR019787 -
Acco06g0549 1299 MobiDBLite consensus disorder prediction 1 53 - -
Acco06g0549 1299 MobiDBLite consensus disorder prediction 1004 1025 - -
Acco06g0549 1299 MobiDBLite consensus disorder prediction 258 278 - -
Acco06g0549 1299 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 692 801 IPR013083 -
Acco06g0549 1299 SMART PHD_3 744 802 IPR001965 -
Acco06g0549 1299 SMART PHD_3 702 743 IPR001965 -
Acco06g0549 1299 SUPERFAMILY FYVE/PHD zinc finger 695 749 IPR011011 -
Acco06g0549 1299 SMART AT_hook_2 265 277 IPR017956 GO:0003677
Acco06g0549 1299 SMART AT_hook_2 185 197 IPR017956 GO:0003677
Acco06g0549 1299 SMART AT_hook_2 305 317 IPR017956 GO:0003677
Acco06g0549 1299 SMART AT_hook_2 225 237 IPR017956 GO:0003677
Acco06g0549 1299 SMART AT_hook_2 324 336 IPR017956 GO:0003677
Acco06g0549 1299 CDD PHD2_CHD_II 703 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0549 Acco-ChrAcco06 3426649 3435986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0549 124 1003 PHD Transcription Factor Family AT5G36670 38.901 0.0 585
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1865 02 14796205 14805520 Acco06g0549 06 3426649 3435986 CCT
Acco06g0549 06 3426649 3435986 Acco06g0549 06 3426649 3435986 ECH