Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g0522 ATGAACGTCTCTATGGTAATGAGCAGCCATGTAACACATCCCCTTAAAAATAGTCCCCTCAGCAGTCGAAATTCGAATCTGATCACTCTTCCACGGCAGAAAGAGAAGGTGGTCGTGGTCATCGGAGCCACCGGCACCGGAAAGTCCAGGCTCTCCATCGAACTGGGCACCCTTTTTACCGCACAAATCATTAATTCCGACAAAATGCAAGTCTACGAAGGCCTTGACATAGTCACCAACAAAATCACTAAGGAAGACCAACGAGGCGTGCCTCACCATTTGTTAGGAACAGAGAGCTCCAACTCAGAGTTCACAGCCTCCCACTTCAGTGAGGCCGCTTTCCTCGCCATCGAGTCAATTACGTCTTCCGGACAGCTTCCGATCATCGTGGGAGGATCCAACTCATATATTGAGGCACTTTTCGACGACGACGACTATAAATTCCGATCAAGGTATGATTTCTGTTGTCTCTGGGTAGACGTGTCATTGCCGGAGCTCGACCAATACGTGGCCAAACGGGTTGATCAAATGTTAGAGAGTGGAATGGTTGATGAACTGAGACCATTTTTCAATCCAAAGGGAGACTACTCTCGAGGGATTAGGAAAGCTATTGGAGTTCCAGAGTTCCATCAGTATTTTCAAAAGGAATCGTTTATTAGGGATGAAGGATTCAAGCAGAGGTTACTGGAAGAAGCAGTGAATGCAATGAAGAAGAACACGCACAAATTGTCACGTAGACAATTGGGGAAGATTCAGAGACTGTGCGATGTGAAGAGATGGAAGATTCGTCGGCTAGACGCCACAACCGTGTTCCGCAAGCATGGGGAAGAAGCAGAAGAGGAGTGGAAGAAGGTTGTGGCAGTGCCAAGTGCTATGATCGTAGCCAGGTTTCTTTACGATTTACCATCTGCGAATGTTGGTGCTGGCCTGAGACTGTTGCCATCTTCTTTGGCCCTGGAAAGCGCATGGCCACCGCAACGTGCTGAATACCCACGACTCTCCATCTTCTAA 1011 0.4807 MNVSMVMSSHVTHPLKNSPLSSRNSNLITLPRQKEKVVVVIGATGTGKSRLSIELGTLFTAQIINSDKMQVYEGLDIVTNKITKEDQRGVPHHLLGTESSNSEFTASHFSEAAFLAIESITSSGQLPIIVGGSNSYIEALFDDDDYKFRSRYDFCCLWVDVSLPELDQYVAKRVDQMLESGMVDELRPFFNPKGDYSRGIRKAIGVPEFHQYFQKESFIRDEGFKQRLLEEAVNAMKKNTHKLSRRQLGKIQRLCDVKRWKIRRLDATTVFRKHGEEAEEEWKKVVAVPSAMIVARFLYDLPSANVGAGLRLLPSSLALESAWPPQRAEYPRLSIF 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g0522 336 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 145 IPR027417 -
Acco06g0522 336 Gene3D - 34 298 IPR027417 -
Acco06g0522 336 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 163 262 - -
Acco06g0522 336 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 34 297 IPR039657 -
Acco06g0522 336 FunFam Adenylate isopentenyltransferase 5, chloroplastic 163 262 - -
Acco06g0522 336 Pfam IPP transferase 70 143 - -
Acco06g0522 336 Pfam IPP transferase 148 248 - -
Acco06g0522 336 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g0522 Acco-ChrAcco06 3241686 3242696 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g0522 150 298 C2H2 Transcription Factor Family AT2G27760 32.955 2.19e-20 89.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco02g1901 02 15165314 15166315 Acco06g0522 06 3241686 3242696 CCT
Acco06g0522 06 3241686 3242696 Acco06g0522 06 3241686 3242696 ECH